VIT_17s0000g05400 (Vitis vinifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 VIT_17s0000g05400 T282089_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.666 0.656
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.666 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_17s0000g05400.t01 Myb 14 61
VIT_17s0000g05400.t01 Myb 67 112

Links

Other Myb/SANT family TFs
Other Vitis vinifera TFs

227 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
RAX3 Arabidopsis thaliana AT3G49690 D 0.666
Bostr.6864s0273 Boechera stricta Bostr.6864s0273 I 0.696
Bostr.26833s0495 Boechera stricta Bostr.26833s0495 I 0.661
Bostr.25542s0241 Boechera stricta Bostr.25542s0241 I 0.663
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I 0.672
Aquca_062_00019 Aquilegia coerulea Aquca_062_00019 I 0.666
mgf024894m Mimulus guttatus mgf024894m I 0.666
mgf021409m Mimulus guttatus mgf021409m I 0.692
mgf017404m Mimulus guttatus mgf017404m I 0.724
mgf012871m Mimulus guttatus mgf012871m I 0.715
Cucsa.395340 Cucumis sativus Cucsa.395340 I 0.666
Cagra.0558s0004 Capsella grandiflora Cagra.0558s0004 I 0.662
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I 0.672
Ciclev10012151m.g Citrus clementina Ciclev10012151m.g I 0.675
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.666
Carubv10027655m.g Capsella rubella Carubv10027655m.g I 0.672
Carubv10026749m.g Capsella rubella Carubv10026749m.g I 0.661
Carubv10023744m.g Capsella rubella Carubv10023744m.g I 0.662
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.696
Carubv10006843m.g Capsella rubella Carubv10006843m.g I 0.663
Cagra.4290s0002 Capsella grandiflora Cagra.4290s0002 I 0.663
Cagra.2848s0043 Capsella grandiflora Cagra.2848s0043 I 0.661
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.696
Cucsa.385830 Cucumis sativus Cucsa.385830 I 0.692
Cucsa.306690 Cucumis sativus Cucsa.306690 I 0.705
Cucsa.292610 Cucumis sativus Cucsa.292610 I 0.690
Traes_5BL_C1D4586B1 Triticum aestivum Traes_5BL_C1D4586B1 I 0.670
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.714
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.714
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.714
Solyc06g074910.2 Solanum lycopersicum Solyc06g074910.2 I 0.685
TCM_042012 Theobroma cacao TCM_042012 I 0.666
TCM_038898 Theobroma cacao TCM_038898 I 0.670
TCM_022255 Theobroma cacao TCM_022255 I 0.696
Solyc11g069030.1 Solanum lycopersicum Solyc11g069030.1 I 0.683
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.666
Ca_17470 Cicer arietinum Ca_17470 I 0.676
Cla008857 Citrullus lanatus Cla008857 I 0.666
Cucsa.288590 Cucumis sativus Cucsa.288590 I 0.693
cassava34548.m1 Manihot esculenta cassava34548.m1 I 0.667
cassava28503.m1 Manihot esculenta cassava28503.m1 I 0.666
cassava27131.m1 Manihot esculenta cassava27131.m1 I 0.666
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.666
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.704
Pm026353 Prunus mume Pm026353 I 0.691
Pm001105 Prunus mume Pm001105 I 0.666
Cla018072 Citrullus lanatus Cla018072 I 0.705
Solyc09g008250.2 Solanum lycopersicum Solyc09g008250.2 I 0.680
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.813
orange1.1g020997m.g Citrus sinensis orange1.1g020997m.g I 0.675
orange1.1g019787m.g Citrus sinensis orange1.1g019787m.g I 0.690
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.666
MDP0000836365 Malus domestica MDP0000836365 I 0.671
MDP0000785820 Malus domestica MDP0000785820 I 0.671
MDP0000245436 Malus domestica MDP0000245436 I 0.680
MDP0000229498 Malus domestica MDP0000229498 I 0.666
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.661
Lus10023002.g Linum usitatissimum Lus10023002.g I 0.691
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.782
Pavir.Ba03178 Panicum virgatum Pavir.Ba03178 I 0.696
Pavir.Bb01783 Panicum virgatum Pavir.Bb01783 I 0.696
LjSGA_028088.1 Lotus japonicus LjSGA_028088.1 I 0.676
PK16424.1 Cannabis sativa PK16424.1 I 0.675
Thhalv10015689m.g Eutrema salsugineum Thhalv10015689m.g I 0.661
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I 0.672
SapurV1A.1188s0040 Salix purpurea SapurV1A.1188s0040 I 0.666
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.773
SapurV1A.0589s0050 Salix purpurea SapurV1A.0589s0050 I 0.675
SapurV1A.0049s0100 Salix purpurea SapurV1A.0049s0100 I 0.666
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.688
Lus10021428.g Linum usitatissimum Lus10021428.g I 0.705
Lus10016139.g Linum usitatissimum Lus10016139.g I 0.705
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.661
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.812
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.760
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.691
Eucgr.C03699 Eucalyptus grandis Eucgr.C03699 I 0.692
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.722
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.722
Eucgr.B03941 Eucalyptus grandis Eucgr.B03941 I 0.696
Eucgr.A01670 Eucalyptus grandis Eucgr.A01670 I 0.710
Ciclev10028804m.g Citrus clementina Ciclev10028804m.g I 0.690
evm.TU.supercontig_102.29 Carica papaya evm.TU.supercontig_102.29 I 0.675
evm.TU.supercontig_65.37 Carica papaya evm.TU.supercontig_65.37 I 0.687
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.666
Gorai.013G269300 Gossypium raimondii Gorai.013G269300 I 0.666
Gorai.013G246200 Gossypium raimondii Gorai.013G246200 I 0.662
Gorai.009G110800 Gossypium raimondii Gorai.009G110800 I 0.666
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I 0.696
Gorai.001G010000 Gossypium raimondii Gorai.001G010000 I 0.669
gene28902-v1.0-hybrid Fragaria vesca gene28902-v1.0-hybrid I 0.666
gene09663-v1.0-hybrid Fragaria vesca gene09663-v1.0-hybrid I 0.680
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.666
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.662
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.782
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.732
MLOC_5098 Hordeum vulgare MLOC_5098 I 0.661
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.764
GLYMA12G30140 Glycine max GLYMA12G30140 I 0.676
GLYMA12G08480 Glycine max GLYMA12G08480 I 0.676
GLYMA11G19980 Glycine max GLYMA11G19980 I 0.676
GLYMA10G06190 Glycine max GLYMA10G06190 I 0.666
GLYMA07G15250 Glycine max GLYMA07G15250 I 0.663
GLYMA01G00805 Glycine max GLYMA01G00805 I 0.693
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.666
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I 0.672
MYB87 Arabidopsis lyrata fgenesh2_kg.7__271__AT4G37780.1 I 0.663
RAX2 Arabidopsis lyrata fgenesh2_kg.4__1732__AT2G36890.1 I 0.662
F775_22184 Aegilops tauschii F775_22184 I 0.670
GLYMA13G20510 Glycine max GLYMA13G20510 I 0.666
GLYMA13G39760 Glycine max GLYMA13G39760 I 0.676
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.705
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I 0.672
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I 0.677
GSMUA_Achr4G25260_001 Musa acuminata GSMUA_Achr4G25260_001 I 0.662
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.776
GSMUA_Achr1G03140_001 Musa acuminata GSMUA_Achr1G03140_001 I 0.694
GSMUA_Achr10G08350_001 Musa acuminata GSMUA_Achr10G08350_001 I 0.668
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.688
GRMZM2G090837 Zea mays GRMZM2G090837 I 0.666
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.773
GLYMA17G16980 Glycine max GLYMA17G16980 I 0.671
GLYMA14G10340 Glycine max GLYMA14G10340 I 0.666
F775_14388 Aegilops tauschii F775_14388 I 0.714
BRADI4G38965 Brachypodium distachyon BRADI4G38965 I 0.666
Bo3g019230 Brassica oleracea Bo3g019230 I 0.661
Bo2g168190 Brassica oleracea Bo2g168190 I 0.672
Bo2g030240 Brassica oleracea Bo2g030240 I 0.661
Bo1g003420 Brassica oleracea Bo1g003420 I 0.687
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.697
ATMYB68 Arabidopsis thaliana AT5G65790 I 0.672
MYB36 Arabidopsis thaliana AT5G57620 I 0.661
MYB87 Arabidopsis thaliana AT4G37780 I 0.663
RAX2 Arabidopsis thaliana AT2G36890 I 0.662
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.720
AMTR_s00076p00157170 Amborella trichopoda AMTR_s00076p00157170 I 0.666
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I 0.673
Bo3g031390 Brassica oleracea Bo3g031390 I 0.662
Bo3g097710 Brassica oleracea Bo3g097710 I 0.672
Bra031847 Brassica rapa Bra031847 I 0.672
Bra024419 Brassica rapa Bra024419 I 0.672
Bra023085 Brassica rapa Bra023085 I 0.662
Bra020428 Brassica rapa Bra020428 I 0.661
Bra017963 Brassica rapa Bra017963 I 0.672
Bra011785 Brassica rapa Bra011785 I 0.672
Bra006811 Brassica rapa Bra006811 I 0.661
Bra005234 Brassica rapa Bra005234 I 0.662
Bo9g133340 Brassica oleracea Bo9g133340 I 0.661
Bo9g018910 Brassica oleracea Bo9g018910 I 0.672
Bo8g078940 Brassica oleracea Bo8g078940 I 0.666
Bo4g031070 Brassica oleracea Bo4g031070 I 0.662
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.696
MTR_2g095520 Medicago truncatula MTR_2g095520 I 0.671
PGSC0003DMG400003890 Solanum tuberosum PGSC0003DMG400003890 I 0.680
PRUPE_ppa007823mg Prunus persica PRUPE_ppa007823mg I 0.666
PGSC0003DMG400002013 Solanum tuberosum PGSC0003DMG400002013 I 0.680
PRUPE_ppa008732mg Prunus persica PRUPE_ppa008732mg I 0.680
OBART03G13840 Oryza barthii OBART03G13840 I 0.714
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.714
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.714
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.714
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.714
mgf011646m Mimulus guttatus mgf011646m I 0.675
POPTR_0009s01270 Populus trichocarpa POPTR_0009s01270 I 0.666
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.714
OPUNC12G18070 Oryza punctata OPUNC12G18070 I 0.676
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.714
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.732
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.676
MTR_3g103570 Medicago truncatula MTR_3g103570 I 0.661
Si030544m.g Setaria italica Si030544m.g I 0.696
MYB36 Arabidopsis lyrata scaffold_802340.1 I 0.661
MTR_4g057635 Medicago truncatula MTR_4g057635 I 0.676
Sb02g012860 Sorghum bicolor Sb02g012860 I 0.696
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.661
POPTR_0004s22490 Populus trichocarpa POPTR_0004s22490 I 0.666
O49746_ARATH Arabidopsis thaliana O49746_ARATH I 0.666
OB03G23760 Oryza brachyantha OB03G23760 I 0.714
POPTR_0006s12530 Populus trichocarpa POPTR_0006s12530 I 0.675
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.688
MDP0000258046 Malus domestica MDP0000258046 N 0.751
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.809
MDP0000580841 Malus domestica MDP0000580841 N 0.708
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.738
Bo7g091360 Brassica oleracea Bo7g091360 N 0.721
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.825
Ca_10555 Cicer arietinum Ca_10555 N 0.727
TCM_018082 Theobroma cacao TCM_018082 N 0.712
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.721
MYB35 Arabidopsis thaliana AT3G28470 N 0.687
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.796
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.754
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.796
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.737
TCM_045715 Theobroma cacao TCM_045715 N 0.816
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.812
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.785
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N 0.684
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.809
Cla019436 Citrullus lanatus Cla019436 N 0.808
e_gw1.284.46.1 Physcomitrella patens e_gw1.284.46.1 N 0.692
e_gw1.46.242.1 Physcomitrella patens e_gw1.46.242.1 N 0.687
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.752
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.671
gw1.295.9.1 Physcomitrella patens gw1.295.9.1 N 0.704
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.671
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.729
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.727
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.704
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.746
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.704
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.704
e_gw1.204.95.1 Physcomitrella patens e_gw1.204.95.1 N 0.670
e_gw1.141.66.1 Physcomitrella patens e_gw1.141.66.1 N 0.682
Pm015813 Prunus mume Pm015813 N 0.720
Pm024633 Prunus mume Pm024633 N 0.796
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.738
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.816
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.854
Bra025337 Brassica rapa Bra025337 N 0.721
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.735
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.746
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.756
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.704
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.808
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.761
MTR_3g045430 Medicago truncatula MTR_3g045430 N 0.662