CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_18s0001g11170
(
Vitis vinifera
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
VIT_18s0001g11170
T282105_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
OS02G0187700
M02327_2.00
Oryza sativa
NTAMCKGTHN
NDACMGKTAN
PBM
Weirauch et al.(2014)
pTH8645
0.752
0.785
MYB1
M07068_2.00
Arabidopsis thaliana
HDNNDNHWHWAACSGYHWH
DWDRCSGTTWDWDNHNNHD
Dap-seq
OMalley et al.(2016)
MYB1_col_a
0.695
0.710
PK07741.1
M01277_2.00
Cannabis sativa
HAMCBRHHN
NDDYVGKTD
PBM
Lambert et al.(2019)
pTH11469
0.688
0.742
PK28565.1
M02357_2.00
Cannabis sativa
TAACBGTY
RACVGTTA
PBM
Weirauch et al.(2014)
pTH9653
0.676
0.774
AtMYB70
M01071_2.00
Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD
PBM
Sullivan et al.(2014)
pTH8588
0.676
0.763
AtMYB70
M07048_2.00
Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR
Dap-seq
OMalley et al.(2016)
MYB70_col_a
0.676
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_18s0001g11170.t01
Myb
35
81
KGSWSAEEDRVLTRLVERYGARNWSLISRYIKGRSGKSCRLRWCNQL
VIT_18s0001g11170.t01
Myb
87
132
HRPFSAAEDDTILAAHARYGNRWATIARLLPGRTDNAVKNHWNSTL
Links
Other
Myb/SANT
family TFs
Other
Vitis vinifera
TFs
210 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla022889
Citrullus lanatus
Cla022889
I
0.843
Cucsa.232630
Cucumis sativus
Cucsa.232630
I
0.843
TCM_033907
Theobroma cacao
TCM_033907
I
0.839
SapurV1A.0525s0230
Salix purpurea
SapurV1A.0525s0230
I
0.837
Gorai.010G016800
Gossypium raimondii
Gorai.010G016800
I
0.833
Pm005220
Prunus mume
Pm005220
I
0.823
MDP0000894463
Malus domestica
MDP0000894463
I
0.823
PRUPE_ppa010735mg
Prunus persica
PRUPE_ppa010735mg
I
0.823
Lus10032764.g
Linum usitatissimum
Lus10032764.g
I
0.820
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.807
Gorai.009G208900
Gossypium raimondii
Gorai.009G208900
I
0.807
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.807
Cla021015
Citrullus lanatus
Cla021015
I
0.799
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.798
30170.m013927
Ricinus communis
30170.m013927
I
0.798
gene09039-v1.0-hybrid
Fragaria vesca
gene09039-v1.0-hybrid
I
0.798
MDP0000477900
Malus domestica
MDP0000477900
I
0.796
MDP0000823270
Malus domestica
MDP0000823270
I
0.796
MDP0000784297
Malus domestica
MDP0000784297
I
0.796
PK29071.1
Cannabis sativa
PK29071.1
I
0.796
MDP0000480596
Malus domestica
MDP0000480596
I
0.796
MDP0000641708
Malus domestica
MDP0000641708
I
0.796
mgf006151m
Mimulus guttatus
mgf006151m
I
0.792
GLYMA06G04010
Glycine max
GLYMA06G04010
I
0.791
Lus10021762.g
Linum usitatissimum
Lus10021762.g
I
0.790
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
0.789
mgf003084m
Mimulus guttatus
mgf003084m
I
0.782
MTR_3g101290
Medicago truncatula
MTR_3g101290
I
0.780
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
0.775
Solyc04g079360.1
Solanum lycopersicum
Solyc04g079360.1
I
0.775
PGSC0003DMG400007994
Solanum tuberosum
PGSC0003DMG400007994
I
0.775
GRMZM2G050550
Zea mays
GRMZM2G050550
I
0.774
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.770
Eucgr.F00031
Eucalyptus grandis
Eucgr.F00031
I
0.769
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.768
cassava46434.m1
Manihot esculenta
cassava46434.m1
I
0.768
Eucgr.F02372
Eucalyptus grandis
Eucgr.F02372
I
0.766
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.765
Sb02g013010
Sorghum bicolor
Sb02g013010
I
0.756
Pavir.Ba03084
Panicum virgatum
Pavir.Ba03084
I
0.756
Si032789m.g
Setaria italica
Si032789m.g
I
0.756
OPUNC02G05820
Oryza punctata
OPUNC02G05820
I
0.752
ONIVA09G00250
Oryza nivara
ONIVA09G00250
I
0.752
ONIVA02G08210
Oryza nivara
ONIVA02G08210
I
0.752
OMERI08G05160
Oryza meridionalis
OMERI08G05160
I
0.752
ORUFI02G06760
Oryza rufipogon
ORUFI02G06760
I
0.752
OS02G0187700
Oryza sativa
OS02G0187700
D
0.752
OS09G0106700
Oryza sativa
OS09G0106700
I
0.752
ORUFI09G00360
Oryza rufipogon
ORUFI09G00360
I
0.752
OMERI02G07700
Oryza meridionalis
OMERI02G07700
I
0.752
ORGLA02G0061500
Oryza glaberrima
ORGLA02G0061500
I
0.752
ORGLA09G0002900
Oryza glaberrima
ORGLA09G0002900
I
0.752
OPUNC12G06260
Oryza punctata
OPUNC12G06260
I
0.752
OB09G10200
Oryza brachyantha
OB09G10200
I
0.752
Traes_5DL_92CBBE968
Triticum aestivum
Traes_5DL_92CBBE968
I
0.752
MLOC_7426
Hordeum vulgare
MLOC_7426
I
0.752
BGIOSGA030245
Oryza indica
BGIOSGA030245
I
0.752
LPERR09G00910
Leersia perrieri
LPERR09G00910
I
0.752
BRADI3G06470
Brachypodium distachyon
BRADI3G06470
I
0.752
Traes_5BL_486D0D865
Triticum aestivum
Traes_5BL_486D0D865
I
0.752
MLOC_64817
Hordeum vulgare
MLOC_64817
I
0.752
OGLUM09G00340
Oryza glumaepatula
OGLUM09G00340
I
0.752
OBART09G00310
Oryza barthii
OBART09G00310
I
0.752
OGLUM02G06640
Oryza glumaepatula
OGLUM02G06640
I
0.752
mgf025567m
Mimulus guttatus
mgf025567m
I
0.742
POPTR_0002s13030
Populus trichocarpa
POPTR_0002s13030
I
0.740
BRADI4G08220
Brachypodium distachyon
BRADI4G08220
I
0.736
Si017917m.g
Setaria italica
Si017917m.g
I
0.735
Pavir.J23512
Panicum virgatum
Pavir.J23512
I
0.735
Pavir.Ab00649
Panicum virgatum
Pavir.Ab00649
I
0.735
Sb04g005940
Sorghum bicolor
Sb04g005940
I
0.735
Ca_01522
Cicer arietinum
Ca_01522
I
0.735
GRMZM2G145444
Zea mays
GRMZM2G145444
I
0.735
LPERR02G05810
Leersia perrieri
LPERR02G05810
I
0.735
Gorai.009G275100
Gossypium raimondii
Gorai.009G275100
I
0.727
GRMZM2G087955
Zea mays
GRMZM2G087955
I
0.727
Eucgr.E02958
Eucalyptus grandis
Eucgr.E02958
I
0.724
OGLUM06G23260
Oryza glumaepatula
OGLUM06G23260
I
0.723
OMERI06G22090
Oryza meridionalis
OMERI06G22090
I
0.723
ONIVA06G26080
Oryza nivara
ONIVA06G26080
I
0.723
ORGLA06G0184100
Oryza glaberrima
ORGLA06G0184100
I
0.723
BGIOSGA020819
Oryza indica
BGIOSGA020819
I
0.723
ORUFI06G23790
Oryza rufipogon
ORUFI06G23790
I
0.723
OS06G0637500
Oryza sativa
OS06G0637500
I
0.723
AMTR_s00007p00169630
Amborella trichopoda
AMTR_s00007p00169630
I
0.721
POPTR_0007s10490
Populus trichocarpa
POPTR_0007s10490
I
0.719
Aquca_007_00580
Aquilegia coerulea
Aquca_007_00580
I
0.719
SELMODRAFT_103999
Selaginella moellendorffii
SELMODRAFT_103999
I
0.717
SELMODRAFT_99462
Selaginella moellendorffii
SELMODRAFT_99462
I
0.717
Pavir.Db00693
Panicum virgatum
Pavir.Db00693
I
0.715
GRMZM5G803308
Zea mays
GRMZM5G803308
I
0.715
Pavir.Da00404
Panicum virgatum
Pavir.Da00404
I
0.715
Si006938m.g
Setaria italica
Si006938m.g
I
0.715
GSMUA_Achr1G26140_001
Musa acuminata
GSMUA_Achr1G26140_001
I
0.714
GRMZM2G078820
Zea mays
GRMZM2G078820
I
0.710
29801.m003096
Ricinus communis
29801.m003096
I
0.709
GSMUA_Achr3G13070_001
Musa acuminata
GSMUA_Achr3G13070_001
I
0.706
GSMUA_Achr4G20150_001
Musa acuminata
GSMUA_Achr4G20150_001
I
0.706
LPERR06G18380
Leersia perrieri
LPERR06G18380
I
0.706
GSMUA_Achr3G28230_001
Musa acuminata
GSMUA_Achr3G28230_001
I
0.704
Gorai.012G149000
Gossypium raimondii
Gorai.012G149000
I
0.700
gw1.10.6.1
Physcomitrella patens
gw1.10.6.1
I
0.700
Ciclev10029124m.g
Citrus clementina
Ciclev10029124m.g
I
0.700
orange1.1g040502m.g
Citrus sinensis
orange1.1g040502m.g
I
0.700
GLYMA17G36370
Glycine max
GLYMA17G36370
I
0.699
Sb10g024950
Sorghum bicolor
Sb10g024950
I
0.698
MYB1
Arabidopsis thaliana
AT3G09230
D
0.695
cassava7558.valid.m1
Manihot esculenta
cassava7558.valid.m1
I
0.694
OPUNC06G19910
Oryza punctata
OPUNC06G19910
I
0.693
AMTR_s00029p00183640
Amborella trichopoda
AMTR_s00029p00183640
I
0.693
GSMUA_Achr9G22600_001
Musa acuminata
GSMUA_Achr9G22600_001
I
0.693
SapurV1A.1934s0020
Salix purpurea
SapurV1A.1934s0020
I
0.692
SapurV1A.0919s0160
Salix purpurea
SapurV1A.0919s0160
I
0.692
POPTR_0014s02260
Populus trichocarpa
POPTR_0014s02260
I
0.692
MDP0000478512
Malus domestica
MDP0000478512
I
0.691
cassava1242.valid.m1
Manihot esculenta
cassava1242.valid.m1
I
0.691
evm.TU.supercontig_19.238
Carica papaya
evm.TU.supercontig_19.238
I
0.691
TRAES3BF039800050CFD_g
Triticum aestivum
TRAES3BF039800050CFD_g
I
0.691
MLOC_63964
Hordeum vulgare
MLOC_63964
I
0.690
Traes_7DL_1FA87027B
Triticum aestivum
Traes_7DL_1FA87027B
I
0.690
TRIUR3_25447
Triticum urartu
TRIUR3_25447
I
0.690
TCM_007138
Theobroma cacao
TCM_007138
I
0.690
CM0528.210.nd
Lotus japonicus
CM0528.210.nd
I
0.689
MDP0000319124
Malus domestica
MDP0000319124
I
0.688
MDP0000203733
Malus domestica
MDP0000203733
I
0.688
GSMUA_AchrUn_randomG01280_001
Musa acuminata
GSMUA_AchrUn_randomG01280_001
I
0.688
PK07741.1
Cannabis sativa
PK07741.1
D
0.688
GSMUA_Achr4G12950_001
Musa acuminata
GSMUA_Achr4G12950_001
I
0.687
GLYMA14G06320
Glycine max
GLYMA14G06320
I
0.686
GLYMA02G43280
Glycine max
GLYMA02G43280
I
0.686
cassava8939.m1
Manihot esculenta
cassava8939.m1
I
0.686
MTR_5g082910
Medicago truncatula
MTR_5g082910
I
0.686
chr2.LjT13M01.180.nd
Lotus japonicus
chr2.LjT13M01.180.nd
I
0.685
TCM_042629
Theobroma cacao
TCM_042629
I
0.684
GLYMA05G21220
Glycine max
GLYMA05G21220
I
0.684
Gorai.011G278500
Gossypium raimondii
Gorai.011G278500
I
0.684
GSMUA_Achr1G09750_001
Musa acuminata
GSMUA_Achr1G09750_001
I
0.683
Lus10040239.g
Linum usitatissimum
Lus10040239.g
I
0.683
Solyc05g052850.2
Solanum lycopersicum
Solyc05g052850.2
I
0.683
Lus10028250.g
Linum usitatissimum
Lus10028250.g
I
0.683
orange1.1g012494m.g
Citrus sinensis
orange1.1g012494m.g
I
0.682
Ciclev10031463m.g
Citrus clementina
Ciclev10031463m.g
I
0.682
VIT_03s0180g00210
Vitis vinifera
VIT_03s0180g00210
I
0.681
gene26289-v1.0-hybrid
Fragaria vesca
gene26289-v1.0-hybrid
I
0.681
orange1.1g017566m.g
Citrus sinensis
orange1.1g017566m.g
I
0.681
Ciclev10012003m.g
Citrus clementina
Ciclev10012003m.g
I
0.681
Thhalv10000438m.g
Eutrema salsugineum
Thhalv10000438m.g
I
0.679
e_gw1.53.214.1
Physcomitrella patens
e_gw1.53.214.1
I
0.679
e_gw1.72.10.1
Physcomitrella patens
e_gw1.72.10.1
I
0.679
Pm018862
Prunus mume
Pm018862
I
0.678
mgf023922m
Mimulus guttatus
mgf023922m
I
0.678
Eucgr.J00250
Eucalyptus grandis
Eucgr.J00250
I
0.677
MDP0000284922
Malus domestica
MDP0000284922
I
0.677
chr2.CM0250.240.nd
Lotus japonicus
chr2.CM0250.240.nd
I
0.676
Bo3g062160
Brassica oleracea
Bo3g062160
I
0.676
AtMYB70
Arabidopsis thaliana
AT2G23290
D
0.676
Lus10010260.g
Linum usitatissimum
Lus10010260.g
I
0.676
GLYMA11G05550
Glycine max
GLYMA11G05550
I
0.676
AtMYB70
Arabidopsis lyrata
fgenesh2_kg.4__260__AT2G23290.1
I
0.676
PK28565.1
Cannabis sativa
PK28565.1
D
0.676
Cucsa.352560
Cucumis sativus
Cucsa.352560
I
0.675
MDP0000463846
Malus domestica
MDP0000463846
I
0.675
Pm005332
Prunus mume
Pm005332
I
0.675
PRUPE_ppa008979mg
Prunus persica
PRUPE_ppa008979mg
I
0.675
Cla020946
Citrullus lanatus
Cla020946
I
0.675
mgf020432m
Mimulus guttatus
mgf020432m
I
0.674
PK16550.1
Cannabis sativa
PK16550.1
I
0.673
GSMUA_Achr4G09450_001
Musa acuminata
GSMUA_Achr4G09450_001
I
0.671
MDP0000275800
Malus domestica
MDP0000275800
I
0.671
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.671
gene00185-v1.0-hybrid
Fragaria vesca
gene00185-v1.0-hybrid
I
0.670
Lus10014103.g
Linum usitatissimum
Lus10014103.g
I
0.670
mgf018580m
Mimulus guttatus
mgf018580m
I
0.670
Aquca_083_00054
Aquilegia coerulea
Aquca_083_00054
I
0.670
orange1.1g022144m.g
Citrus sinensis
orange1.1g022144m.g
I
0.669
Thhalv10021963m.g
Eutrema salsugineum
Thhalv10021963m.g
I
0.669
Ciclev10001979m.g
Citrus clementina
Ciclev10001979m.g
I
0.669
AtMYB1
Arabidopsis lyrata
scaffold_301043.1
I
0.669
gene20888-v1.0-hybrid
Fragaria vesca
gene20888-v1.0-hybrid
I
0.669
SapurV1A.0709s0060
Salix purpurea
SapurV1A.0709s0060
I
0.668
Gorai.010G023500
Gossypium raimondii
Gorai.010G023500
I
0.668
PGSC0003DMG400020338
Solanum tuberosum
PGSC0003DMG400020338
I
0.667
Bostr.27895s0157
Boechera stricta
Bostr.27895s0157
I
0.667
POPTR_0002s12410
Populus trichocarpa
POPTR_0002s12410
I
0.667
evm.TU.supercontig_6.98
Carica papaya
evm.TU.supercontig_6.98
I
0.667
Solyc09g011780.2
Solanum lycopersicum
Solyc09g011780.2
I
0.667
30170.m013698
Ricinus communis
30170.m013698
I
0.666
SapurV1A.0597s0060
Salix purpurea
SapurV1A.0597s0060
I
0.666
PK17282.1
Cannabis sativa
PK17282.1
I
0.666
MLOC_10322
Hordeum vulgare
MLOC_10322
I
0.666
cassava47374.m1
Manihot esculenta
cassava47374.m1
I
0.666
LPERR01G40230
Leersia perrieri
LPERR01G40230
I
0.666
Gorai.009G276400
Gossypium raimondii
Gorai.009G276400
I
0.666
evm.TU.supercontig_21.145
Carica papaya
evm.TU.supercontig_21.145
I
0.666
POPTR_0005s18620
Populus trichocarpa
POPTR_0005s18620
I
0.665
GLYMA01G26650
Glycine max
GLYMA01G26650
I
0.664
TCM_021796
Theobroma cacao
TCM_021796
I
0.664
GLYMA03G15810
Glycine max
GLYMA03G15810
I
0.664
PRUPE_ppa006851mg
Prunus persica
PRUPE_ppa006851mg
I
0.664
MTR_4g019370
Medicago truncatula
MTR_4g019370
I
0.664
Gorai.006G179700
Gossypium raimondii
Gorai.006G179700
I
0.664
Cla018417
Citrullus lanatus
Cla018417
I
0.664
Cucsa.066910
Cucumis sativus
Cucsa.066910
I
0.664
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.664
Pm002576
Prunus mume
Pm002576
I
0.664
27798.m000612
Ricinus communis
27798.m000612
I
0.664
MTR_6g015455
Medicago truncatula
MTR_6g015455
I
0.663
Bra011749
Brassica rapa
Bra011749
I
0.662
Bo1g004900
Brassica oleracea
Bo1g004900
I
0.662
GSMUA_Achr8G25220_001
Musa acuminata
GSMUA_Achr8G25220_001
I
0.662