CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TVAG_023420
(
Trichomonas vaginalis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
TVAG_023420
T282387_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TVAG_087680
M02336_2.00
Trichomonas vaginalis
HARCCTTANH
DNTAAGGYTD
PBM
Weirauch et al.(2014)
pTH7923
0.692
0.785
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_023420
Myb
18
64
SARFTAEEDNLLKELVKDKKNKTWKEIANFLPGRTACQCRDRYNQYL
TVAG_023420
Myb
70
115
NKPWSSEEDEIIIEKYKIFGPHWVKISQFLPGRSGNNIKNRWNSAL
Links
Other
Myb/SANT
family TFs
Other
Trichomonas vaginalis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_461870
Trichomonas vaginalis
TVAG_461870
I
0.818
TVAG_458070
Trichomonas vaginalis
TVAG_458070
I
0.796
TVAG_165400
Trichomonas vaginalis
TVAG_165400
N
0.781
TVAG_165390
Trichomonas vaginalis
TVAG_165390
N
0.781
TVAG_165380
Trichomonas vaginalis
TVAG_165380
N
0.781
TVAG_165410
Trichomonas vaginalis
TVAG_165410
I
0.772
TVAG_165370
Trichomonas vaginalis
TVAG_165370
N
0.746
TVAG_121110
Trichomonas vaginalis
TVAG_121110
N
0.739
TVAG_411550
Trichomonas vaginalis
TVAG_411550
N
0.720
TVAG_162080
Trichomonas vaginalis
TVAG_162080
N
0.720
TVAG_162070
Trichomonas vaginalis
TVAG_162070
N
0.720
TVAG_411560
Trichomonas vaginalis
TVAG_411560
N
0.715
TVAG_027730
Trichomonas vaginalis
TVAG_027730
N
0.708
TVAG_004600
Trichomonas vaginalis
TVAG_004600
N
0.703
TVAG_087680
Trichomonas vaginalis
TVAG_087680
D
0.692
TVAG_268910
Trichomonas vaginalis
TVAG_268910
I
0.681
TVAG_079040
Trichomonas vaginalis
TVAG_079040
N
0.666