CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TVAG_119520
(
Trichomonas vaginalis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
TVAG_119520
T282465_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TVAG_119520
M02338_2.00
Trichomonas vaginalis
NNNHRRYNNN
NNNRYYDNNN
PBM
Weirauch et al.(2014)
pTH7886
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.661
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02338_2.00
Myb
12
58
KVKFTPEEDDLLTEIIERIGTNDWELVSKEMKKRTARQCRERWINYL
M02338_2.00
Myb
64
107
NDPWTEEEDKLLDELYAELGSRWHKIAEYFPTRSGNCVRNRFKL
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_119520
Myb
12
58
KVKFTPEEDDLLTEIIERIGTNDWELVSKEMKKRTARQCRERWINYL
TVAG_119520
Myb
64
107
NDPWTEEEDKLLDELYAELGSRWHKIAEYFPTRSGNCVRNRFKL
Links
Other
Myb/SANT
family TFs
Other
Trichomonas vaginalis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_459370
Trichomonas vaginalis
TVAG_459370
I
0.728
TVAG_120380
Trichomonas vaginalis
TVAG_120380
I
0.722
TVAG_422800
Trichomonas vaginalis
TVAG_422800
I
0.699