CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TVAG_219500
(
Trichomonas vaginalis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
TVAG_219500
T282562_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TVAG_237720
M02339_2.00
Trichomonas vaginalis
NNNMCGHWVN
NBWDCGKNNN
PBM
Weirauch et al.(2014)
pTH7885
0.664
0.728
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_219500
Myb
17
63
RQKFTSEEDKRLCELVTVYGNKAWKKIAQIMQTKNTRQCRERYINYL
TVAG_219500
Myb
69
113
NGPWTQEEDYSLIQFASQMGPHWSKIAKMFPTRSDVNVKNRYALL
Links
Other
Myb/SANT
family TFs
Other
Trichomonas vaginalis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_237720
Trichomonas vaginalis
TVAG_237720
D
0.664