Ca_03888 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_03888 T282943_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.682 0.737
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.666 0.711
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.666 0.711
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.666 0.711
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.664 0.711
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.664 0.711
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.664 0.711
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.664 0.711
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.664 0.711
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_03888 Myb 28 65

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

219 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_01911 Cicer arietinum Ca_01911 I 0.764
Ca_01912 Cicer arietinum Ca_01912 I 0.764
MTR_1g033620 Medicago truncatula MTR_1g033620 I 0.755
F775_08891 Aegilops tauschii F775_08891 I 0.755
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I 0.755
mgf017789m Mimulus guttatus mgf017789m I 0.755
cassava4263.m1 Manihot esculenta cassava4263.m1 I 0.755
PGSC0003DMG400009570 Solanum tuberosum PGSC0003DMG400009570 I 0.748
MLOC_76271 Hordeum vulgare MLOC_76271 I 0.744
Gorai.008G233500 Gossypium raimondii Gorai.008G233500 I 0.744
OB01G15640 Oryza brachyantha OB01G15640 I 0.744
BRADI2G05590 Brachypodium distachyon BRADI2G05590 I 0.744
SapurV1A.1882s0030 Salix purpurea SapurV1A.1882s0030 I 0.732
MDP0000233793 Malus domestica MDP0000233793 I 0.731
PGSC0003DMG400020730 Solanum tuberosum PGSC0003DMG400020730 I 0.725
GLYMA05G36290 Glycine max GLYMA05G36290 I 0.716
TRIUR3_09932 Triticum urartu TRIUR3_09932 I 0.716
OMERI01G05960 Oryza meridionalis OMERI01G05960 I 0.705
Gorai.004G196500 Gossypium raimondii Gorai.004G196500 I 0.705
OBART04G08050 Oryza barthii OBART04G08050 I 0.704
LjSGA_143592.1 Lotus japonicus LjSGA_143592.1 I 0.703
chr4.CM0244.480.nc Lotus japonicus chr4.CM0244.480.nc I 0.703
MTR_4g015130 Medicago truncatula MTR_4g015130 I 0.698
PRUPE_ppa016461mg Prunus persica PRUPE_ppa016461mg I 0.695
TRIUR3_18966 Triticum urartu TRIUR3_18966 I 0.695
PGSC0003DMG400027126 Solanum tuberosum PGSC0003DMG400027126 I 0.691
Traes_3AL_891566958 Triticum aestivum Traes_3AL_891566958 I 0.690
Bostr.7128s0505 Boechera stricta Bostr.7128s0505 I 0.687
Thhalv10008346m.g Eutrema salsugineum Thhalv10008346m.g I 0.687
Bo8g068220 Brassica oleracea Bo8g068220 I 0.687
Bra016530 Brassica rapa Bra016530 I 0.687
Aquca_004_00370 Aquilegia coerulea Aquca_004_00370 I 0.685
PGSC0003DMG400024572 Solanum tuberosum PGSC0003DMG400024572 I 0.685
MTR_4g107230 Medicago truncatula MTR_4g107230 I 0.685
Cucsa.285620 Cucumis sativus Cucsa.285620 I 0.685
Sb03g006450 Sorghum bicolor Sb03g006450 I 0.685
SELMODRAFT_84280 Selaginella moellendorffii SELMODRAFT_84280 I 0.685
GLYMA04G34720 Glycine max GLYMA04G34720 I 0.685
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I 0.685
GLYMA06G19960 Glycine max GLYMA06G19960 I 0.685
PDK_20s1532501g001 Phoenix dactylifera PDK_20s1532501g001 I 0.685
Lus10004248.g Linum usitatissimum Lus10004248.g I 0.685
evm.TU.supercontig_35.12 Carica papaya evm.TU.supercontig_35.12 I 0.685
Solyc07g026680.2 Solanum lycopersicum Solyc07g026680.2 I 0.685
Cla008455 Citrullus lanatus Cla008455 I 0.683
BGIOSGA018651 Oryza indica BGIOSGA018651 I 0.682
Pavir.J19866 Panicum virgatum Pavir.J19866 I 0.682
OSTLU_9418 Ostreococcus lucimarinus OSTLU_9418 I 0.682
ORGLA05G0055700 Oryza glaberrima ORGLA05G0055700 I 0.682
ORUFI01G06450 Oryza rufipogon ORUFI01G06450 I 0.682
ORUFI05G06600 Oryza rufipogon ORUFI05G06600 I 0.682
OS01G0192300 Oryza sativa OS01G0192300 I 0.682
Sb03g003100 Sorghum bicolor Sb03g003100 I 0.682
ORGLA01G0055800 Oryza glaberrima ORGLA01G0055800 I 0.682
Si022796m.g Setaria italica Si022796m.g I 0.682
Traes_3AS_4DF357170 Triticum aestivum Traes_3AS_4DF357170 I 0.682
TRAES3BF096900180CFD_g Triticum aestivum TRAES3BF096900180CFD_g I 0.682
BGIOSGA002215 Oryza indica BGIOSGA002215 I 0.682
Si002353m.g Setaria italica Si002353m.g I 0.682
Pavir.Ea00361 Panicum virgatum Pavir.Ea00361 I 0.682
Pavir.Ca00821 Panicum virgatum Pavir.Ca00821 I 0.682
TRIUR3_35146 Triticum urartu TRIUR3_35146 I 0.682
PDK_20s1503511g002 Phoenix dactylifera PDK_20s1503511g002 I 0.682
OS05G0195700 Oryza sativa OS05G0195700 I 0.682
OBART01G05900 Oryza barthii OBART01G05900 I 0.682
OB01G15870 Oryza brachyantha OB01G15870 I 0.682
OBART05G06190 Oryza barthii OBART05G06190 I 0.682
OGLUM01G06460 Oryza glumaepatula OGLUM01G06460 I 0.682
OGLUM05G06460 Oryza glumaepatula OGLUM05G06460 I 0.682
LPERR05G05230 Leersia perrieri LPERR05G05230 I 0.682
LPERR01G05630 Leersia perrieri LPERR01G05630 I 0.682
BRADI2G05760 Brachypodium distachyon BRADI2G05760 I 0.682
0600010132 Ostreococcus tauri 0600010132 D 0.682
gw1.6.1691.1 Ostreococcus RCC809 gw1.6.1691.1 I 0.682
F775_13323 Aegilops tauschii F775_13323 I 0.682
GRMZM2G049695 Zea mays GRMZM2G049695 I 0.682
OLONG_008716 Oryza longistaminata OLONG_008716 I 0.682
MLOC_70777 Hordeum vulgare MLOC_70777 I 0.682
ONIVA01G06840 Oryza nivara ONIVA01G06840 I 0.682
OPUNC01G05740 Oryza punctata OPUNC01G05740 I 0.682
ONIVA05G06820 Oryza nivara ONIVA05G06820 I 0.682
OMERI01G06100 Oryza meridionalis OMERI01G06100 I 0.682
OLONG_014842 Oryza longistaminata OLONG_014842 I 0.682
OMERI05G05690 Oryza meridionalis OMERI05G05690 I 0.682
OPUNC05G05650 Oryza punctata OPUNC05G05650 I 0.682
Cucsa.094040 Cucumis sativus Cucsa.094040 I 0.677
Aquca_001_00103 Aquilegia coerulea Aquca_001_00103 I 0.677
ORGLA03G0402100 Oryza glaberrima ORGLA03G0402100 I 0.674
OLONG_027538 Oryza longistaminata OLONG_027538 I 0.674
PGSC0003DMG400026442 Solanum tuberosum PGSC0003DMG400026442 I 0.674
TRIUR3_30912 Triticum urartu TRIUR3_30912 I 0.674
Traes_7DS_C6BEE3896 Triticum aestivum Traes_7DS_C6BEE3896 I 0.674
GSMUA_Achr7G06880_001 Musa acuminata GSMUA_Achr7G06880_001 I 0.674
Solyc12g044610.1 Solanum lycopersicum Solyc12g044610.1 I 0.674
OB05G15660 Oryza brachyantha OB05G15660 I 0.674
Gorai.003G175300 Gossypium raimondii Gorai.003G175300 I 0.674
Traes_2AL_C13CD3ECB Triticum aestivum Traes_2AL_C13CD3ECB I 0.674
ONIVA04G06580 Oryza nivara ONIVA04G06580 I 0.673
BGIOSGA015321 Oryza indica BGIOSGA015321 I 0.673
EuGene.0300010169 Micromonas sp RCC299 EuGene.0300010169 I 0.671
estExt_fgenesh1_pg.C_60110 Micromonas pusilla estExt_fgenesh1_pg.C_60110 I 0.671
Bo9g069510 Brassica oleracea Bo9g069510 I 0.670
Bra017487 Brassica rapa Bra017487 I 0.670
AT1G19000 Arabidopsis thaliana AT1G19000 D 0.666
Traes_1BL_1B12D7856 Triticum aestivum Traes_1BL_1B12D7856 I 0.666
Traes_1AL_01E24503F Triticum aestivum Traes_1AL_01E24503F I 0.666
fgenesh2_kg.1__2077__AT1G19000.2 Arabidopsis lyrata fgenesh2_kg.1__2077__AT1G19000.2 I 0.666
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I 0.664
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I 0.664
gene00738-v1.0-hybrid Fragaria vesca gene00738-v1.0-hybrid I 0.664
gene09510-v1.0-hybrid Fragaria vesca gene09510-v1.0-hybrid I 0.664
evm.TU.supercontig_2092.1 Carica papaya evm.TU.supercontig_2092.1 I 0.664
Carubv10020813m.g Capsella rubella Carubv10020813m.g I 0.664
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I 0.664
Ciclev10021454m.g Citrus clementina Ciclev10021454m.g I 0.664
Ciclev10009128m.g Citrus clementina Ciclev10009128m.g I 0.664
Carubv10026634m.g Capsella rubella Carubv10026634m.g I 0.664
Cagra.1415s0002 Capsella grandiflora Cagra.1415s0002 I 0.664
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I 0.664
Bostr.14419s0032 Boechera stricta Bostr.14419s0032 I 0.664
evm.TU.supercontig_5.314 Carica papaya evm.TU.supercontig_5.314 I 0.664
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I 0.664
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I 0.664
gene11419-v1.0-hybrid Fragaria vesca gene11419-v1.0-hybrid I 0.664
orange1.1g022562m.g Citrus sinensis orange1.1g022562m.g I 0.664
SapurV1A.0113s0280 Salix purpurea SapurV1A.0113s0280 I 0.664
SapurV1A.1274s0030 Salix purpurea SapurV1A.1274s0030 I 0.664
LjSGA_014616.1 Lotus japonicus LjSGA_014616.1 I 0.664
SapurV1A.0086s0190 Salix purpurea SapurV1A.0086s0190 I 0.664
SapurV1A.0007s0060 Salix purpurea SapurV1A.0007s0060 I 0.664
Thhalv10000932m.g Eutrema salsugineum Thhalv10000932m.g I 0.664
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I 0.664
chr2.CM0373.230.nd Lotus japonicus chr2.CM0373.230.nd I 0.664
chr2.CM0028.230.nd Lotus japonicus chr2.CM0028.230.nd I 0.664
PK17526.1 Cannabis sativa PK17526.1 D 0.664
PK11714.1 Cannabis sativa PK11714.1 I 0.664
Thhalv10025432m.g Eutrema salsugineum Thhalv10025432m.g I 0.664
LjSGA_030087.1 Lotus japonicus LjSGA_030087.1 I 0.664
orange1.1g047042m.g Citrus sinensis orange1.1g047042m.g I 0.664
Lus10027781.g Linum usitatissimum Lus10027781.g I 0.664
Lus10030813.g Linum usitatissimum Lus10030813.g I 0.664
Lus10013289.g Linum usitatissimum Lus10013289.g I 0.664
Gorai.010G081800 Gossypium raimondii Gorai.010G081800 I 0.664
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I 0.664
Lus10036652.g Linum usitatissimum Lus10036652.g I 0.664
MDP0000230601 Malus domestica MDP0000230601 I 0.664
MDP0000938309 Malus domestica MDP0000938309 I 0.664
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I 0.664
MDP0000875621 Malus domestica MDP0000875621 I 0.664
MDP0000758053 Malus domestica MDP0000758053 I 0.664
MDP0000537549 Malus domestica MDP0000537549 I 0.664
Gorai.007G034000 Gossypium raimondii Gorai.007G034000 I 0.664
Traes_3AS_6626D4A69 Triticum aestivum Traes_3AS_6626D4A69 I 0.664
PGSC0003DMG400033030 Solanum tuberosum PGSC0003DMG400033030 I 0.664
POPTR_0006s15480 Populus trichocarpa POPTR_0006s15480 I 0.664
POPTR_0008s19610 Populus trichocarpa POPTR_0008s19610 I 0.664
PGSC0003DMG400001913 Solanum tuberosum PGSC0003DMG400001913 I 0.664
PGSC0003DMG400000340 Solanum tuberosum PGSC0003DMG400000340 I 0.664
MLOC_79329 Hordeum vulgare MLOC_79329 I 0.664
MTR_6g092540 Medicago truncatula MTR_6g092540 I 0.664
POPTR_0010s04860 Populus trichocarpa POPTR_0010s04860 I 0.664
PRUPE_ppa008425mg Prunus persica PRUPE_ppa008425mg I 0.664
Solyc04g005100.2 Solanum lycopersicum Solyc04g005100.2 I 0.664
Solyc06g071230.2 Solanum lycopersicum Solyc06g071230.2 I 0.664
Solyc03g113620.2 Solanum lycopersicum Solyc03g113620.2 I 0.664
scaffold_800056.1 Arabidopsis lyrata scaffold_800056.1 I 0.664
PRUPE_ppa008539mg Prunus persica PRUPE_ppa008539mg I 0.664
PRUPE_ppa009283mg Prunus persica PRUPE_ppa009283mg I 0.664
MLOC_20277 Hordeum vulgare MLOC_20277 I 0.664
GSMUA_Achr5G09240_001 Musa acuminata GSMUA_Achr5G09240_001 I 0.664
Bo2g132340 Brassica oleracea Bo2g132340 I 0.664
Bo7g105100 Brassica oleracea Bo7g105100 I 0.664
Bo1g113580 Brassica oleracea Bo1g113580 I 0.664
Bo1g051550 Brassica oleracea Bo1g051550 I 0.664
AT1G70000 Arabidopsis thaliana AT1G70000 I 0.664
KUA1 Arabidopsis thaliana AT5G47390 D 0.664
Bra012665 Brassica rapa Bra012665 I 0.664
Bra022127 Brassica rapa Bra022127 I 0.664
GLYMA08G03330 Glycine max GLYMA08G03330 I 0.664
GSMUA_Achr11G00670_001 Musa acuminata GSMUA_Achr11G00670_001 I 0.664
GLYMA02G03020 Glycine max GLYMA02G03020 I 0.664
GLYMA01G04530 Glycine max GLYMA01G04530 I 0.664
Bra026253 Brassica rapa Bra026253 I 0.664
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I 0.664
Solyc12g008800.1 Solanum lycopersicum Solyc12g008800.1 I 0.664
TCM_010118 Theobroma cacao TCM_010118 I 0.664
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I 0.664
cassava23010.valid.m1 Manihot esculenta cassava23010.valid.m1 I 0.664
cassava23011.valid.m1 Manihot esculenta cassava23011.valid.m1 I 0.664
cassava17572.valid.m1 Manihot esculenta cassava17572.valid.m1 I 0.664
30147.m014028 Ricinus communis 30147.m014028 I 0.664
29736.m002089 Ricinus communis 29736.m002089 I 0.664
29794.m003333 Ricinus communis 29794.m003333 I 0.664
Cucsa.098110 Cucumis sativus Cucsa.098110 I 0.664
Cucsa.361050 Cucumis sativus Cucsa.361050 I 0.664
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I 0.664
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D 0.664
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I 0.664
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I 0.664
Cucsa.395160 Cucumis sativus Cucsa.395160 I 0.664
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I 0.664
Pm027228 Prunus mume Pm027228 I 0.664
Pm024648 Prunus mume Pm024648 I 0.664
Traes_3DS_8AF1A10AB Triticum aestivum Traes_3DS_8AF1A10AB I 0.664
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I 0.664
VIT_11s0016g02410 Vitis vinifera VIT_11s0016g02410 I 0.664
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I 0.664
TCM_037687 Theobroma cacao TCM_037687 I 0.664
TCM_013524 Theobroma cacao TCM_013524 I 0.664
TCM_037276 Theobroma cacao TCM_037276 I 0.664
VIT_17s0000g07510 Vitis vinifera VIT_17s0000g07510 I 0.664
Ca_05889 Cicer arietinum Ca_05889 I 0.664
Ca_17597 Cicer arietinum Ca_17597 I 0.664
Cla000916 Citrullus lanatus Cla000916 I 0.664
mgf003276m Mimulus guttatus mgf003276m I 0.664
Ca_15538 Cicer arietinum Ca_15538 I 0.664
Ca_12767 Cicer arietinum Ca_12767 I 0.664
Pm006358 Prunus mume Pm006358 I 0.664
PGSC0003DMG400021599 Solanum tuberosum PGSC0003DMG400021599 I 0.662