Ca_09368 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_09368 T282990_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RAX3
M02700_2.00
Arabidopsis thaliana
SCACCTACCHCCN

NGGDGGTAGGTGS
SELEX
Mathelier et al.(2014)
MA0576.1
0.774 0.839
RAX3
M11043_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ATMYB84_01
0.774 0.839
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_09368 Myb 14 63
Ca_09368 Myb 69 114

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_02122 Aegilops tauschii F775_02122 I 0.000
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.000
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.000
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I 0.000
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.000
WRKY55 Arabidopsis thaliana AT2G40740 D 0.000
Bostr.20505s0113 Boechera stricta Bostr.20505s0113 I 0.000
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.000
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I 0.000
Bo4g114050 Brassica oleracea Bo4g114050 I 0.000
Bo3g035130 Brassica oleracea Bo3g035130 I 0.000
Bo6g066790 Brassica oleracea Bo6g066790 I 0.000
Bo4g190390 Brassica oleracea Bo4g190390 I 0.000
Bo4g190380 Brassica oleracea Bo4g190380 I 0.000
Bra014693 Brassica rapa Bra014693 I 0.000
Bra016974 Brassica rapa Bra016974 I 0.000
Bra016975 Brassica rapa Bra016975 I 0.000
Bra013732 Brassica rapa Bra013732 I 0.000
Bra000202 Brassica rapa Bra000202 I 0.000
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.000
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I 0.000
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.000
Carubv10017859m.g Capsella rubella Carubv10017859m.g I 0.000
evm.TU.supercontig_19.45 Carica papaya evm.TU.supercontig_19.45 I 0.000
Cla007423 Citrullus lanatus Cla007423 I 0.000
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.000
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.000
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.000
Cucsa.143840 Cucumis sativus Cucsa.143840 I 0.000
Eucgr.J00107 Eucalyptus grandis Eucgr.J00107 I 0.000
Eucgr.J02653 Eucalyptus grandis Eucgr.J02653 I 0.000
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.000
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.000
gene21364-v1.0-hybrid Fragaria vesca gene21364-v1.0-hybrid I 0.000
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.000
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.000
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.000
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.000
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.000
LPERR05G09170 Leersia perrieri LPERR05G09170 I 0.000
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.000
Lus10029022.g Linum usitatissimum Lus10029022.g I 0.000
MDP0000460139 Malus domestica MDP0000460139 I 0.000
MDP0000828055 Malus domestica MDP0000828055 I 0.000
cassava26362.m1 Manihot esculenta cassava26362.m1 I 0.000
cassava8741.m1 Manihot esculenta cassava8741.m1 I 0.000
mgf026576m Mimulus guttatus mgf026576m I 0.000
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.000
GSMUA_Achr3G25080_001 Musa acuminata GSMUA_Achr3G25080_001 I 0.000
OBART05G11690 Oryza barthii OBART05G11690 I 0.000
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I 0.000
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I 0.000
BGIOSGA019620 Oryza indica BGIOSGA019620 I 0.000
OLONG_021880 Oryza longistaminata OLONG_021880 I 0.000
OMERI05G10350 Oryza meridionalis OMERI05G10350 I 0.000
ONIVA05G12080 Oryza nivara ONIVA05G12080 I 0.000
OPUNC05G10010 Oryza punctata OPUNC05G10010 I 0.000
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I 0.000
OS05G0321900 Oryza sativa OS05G0321900 I 0.000
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I 0.000
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I 0.000
POPTR_0019s08730 Populus trichocarpa POPTR_0019s08730 I 0.000
Pm019076 Prunus mume Pm019076 I 0.000
PRUPE_ppa014826mg Prunus persica PRUPE_ppa014826mg I 0.000
29729.m002370 Ricinus communis 29729.m002370 I 0.000
29729.m002330 Ricinus communis 29729.m002330 I 0.000
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I 0.000
Si025307m.g Setaria italica Si025307m.g I 0.000
Solyc06g048870.1 Solanum lycopersicum Solyc06g048870.1 I 0.000
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.000
PGSC0003DMG400008776 Solanum tuberosum PGSC0003DMG400008776 I 0.000
Sb02g011050 Sorghum bicolor Sb02g011050 I 0.000
TCM_045555 Theobroma cacao TCM_045555 I 0.000
Traes_6AS_68775100B Triticum aestivum Traes_6AS_68775100B I 0.000
TRIUR3_24602 Triticum urartu TRIUR3_24602 I 0.000
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.000
GRMZM2G127064 Zea mays GRMZM2G127064 I 0.000