Ca_12575 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_12575 T283019_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.664 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_12575 Myb 16 63
Ca_12575 Myb 69 90

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0017s10770 Populus trichocarpa POPTR_0017s10770 N 0.860
Ciclev10016820m.g Citrus clementina Ciclev10016820m.g I 0.859
Solyc02g086690.2 Solanum lycopersicum Solyc02g086690.2 N 0.847
cassava3677.m1 Manihot esculenta cassava3677.m1 N 0.844
Ca_19415 Cicer arietinum Ca_19415 N 0.844
LjSGA_127889.1 Lotus japonicus LjSGA_127889.1 N 0.831
PDK_20s1587411g001 Phoenix dactylifera PDK_20s1587411g001 N 0.754
ORGLA05G0226700 Oryza glaberrima ORGLA05G0226700 N 0.741
OPUNC01G01580 Oryza punctata OPUNC01G01580 N 0.732
PGSC0003DMG400005641 Solanum tuberosum PGSC0003DMG400005641 I 0.730
BGIOSGA035676 Oryza indica BGIOSGA035676 N 0.722
30066.m000714 Ricinus communis 30066.m000714 N 0.707
mgf024669m Mimulus guttatus mgf024669m N 0.701
Ciclev10026578m.g Citrus clementina Ciclev10026578m.g N 0.691
mgf019239m Mimulus guttatus mgf019239m N 0.681
orange1.1g045384m.g Citrus sinensis orange1.1g045384m.g I 0.677
Lus10022259.g Linum usitatissimum Lus10022259.g I 0.677
Pm015692 Prunus mume Pm015692 I 0.677
TCM_016901 Theobroma cacao TCM_016901 I 0.677
MTR_6g006030 Medicago truncatula MTR_6g006030 I 0.677
GLYMA19G14230 Glycine max GLYMA19G14230 I 0.677
GLYMA16G07960 Glycine max GLYMA16G07960 I 0.677
PRUPE_ppa011751mg Prunus persica PRUPE_ppa011751mg I 0.677
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N 0.676
GLYMA19G14270 Glycine max GLYMA19G14270 I 0.673
30064.m000484 Ricinus communis 30064.m000484 N 0.670
GLYMA19G00930 Glycine max GLYMA19G00930 I 0.669
GLYMA05G08690 Glycine max GLYMA05G08690 I 0.669
evm.TU.supercontig_186.7 Carica papaya evm.TU.supercontig_186.7 I 0.668
gene28435-v1.0-hybrid Fragaria vesca gene28435-v1.0-hybrid I 0.668
MDP0000344978 Malus domestica MDP0000344978 I 0.668
F775_04823 Aegilops tauschii F775_04823 I 0.668
Gorai.001G263200 Gossypium raimondii Gorai.001G263200 I 0.668
MLOC_6821 Hordeum vulgare MLOC_6821 I 0.668
MLOC_69570 Hordeum vulgare MLOC_69570 I 0.666
GRMZM2G000818 Zea mays GRMZM2G000818 I 0.665
MTR_7g035075 Medicago truncatula MTR_7g035075 I 0.665
PGSC0003DMG400000485 Solanum tuberosum PGSC0003DMG400000485 I 0.664
MYB05_ANTMA Antirrhinum majus MYB05_ANTMA D 0.664
29904.m003061 Ricinus communis 29904.m003061 N 0.662
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I 0.661
TRIUR3_23036 Triticum urartu TRIUR3_23036 N 0.661
Solyc02g067760.2 Solanum lycopersicum Solyc02g067760.2 I 0.661
Cucsa.339770 Cucumis sativus Cucsa.339770 I 0.661