Ca_12826 (Cicer arietinum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ca_12826 T283023_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GAM1_ORYSI
M11055_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.707 0.717
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC

GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.690 0.707
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM

KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.690 0.707
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN

NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.667 0.696
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW

WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.667 0.696
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN

NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.667 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_12826 Myb 57 104
Ca_12826 Myb 110 154

Links

Other Myb/SANT family TFs
Other Cicer arietinum TFs

88 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ca_06236 Cicer arietinum Ca_06236 I 0.762
Ca_15422 Cicer arietinum Ca_15422 I 0.727
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I 0.710
OBART01G34660 Oryza barthii OBART01G34660 I 0.707
OB01G43550 Oryza brachyantha OB01G43550 I 0.707
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.707
GAMYB Oryza sativa OS01G0812000 I 0.707
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.707
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.707
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.707
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I 0.707
GAM1 Oryza indica BGIOSGA004670 I 0.707
mgf002965m Mimulus guttatus mgf002965m I 0.699
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.698
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.696
Cucsa.364400 Cucumis sativus Cucsa.364400 I 0.695
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.693
Pm016605 Prunus mume Pm016605 I 0.693
Ca_25013 Cicer arietinum Ca_25013 I 0.692
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.690
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.690
Si000907m.g Setaria italica Si000907m.g I 0.690
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.690
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.690
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.690
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.690
F775_28392 Aegilops tauschii F775_28392 I 0.690
Gam1 Hordeum vulgare Q96464_HORVU D 0.690
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.690
mgf025568m Mimulus guttatus mgf025568m I 0.688
TCM_044611 Theobroma cacao TCM_044611 I 0.687
cassava1461.valid.m1 Manihot esculenta cassava1461.valid.m1 I 0.687
evm.TU.supercontig_33.151 Carica papaya evm.TU.supercontig_33.151 I 0.687
Gorai.012G022000 Gossypium raimondii Gorai.012G022000 I 0.687
Gorai.009G301100 Gossypium raimondii Gorai.009G301100 I 0.687
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.687
SapurV1A.0369s0230 Salix purpurea SapurV1A.0369s0230 I 0.687
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I 0.687
POPTR_0001s07330 Populus trichocarpa POPTR_0001s07330 I 0.687
Gorai.010G212500 Gossypium raimondii Gorai.010G212500 I 0.687
POPTR_0003s18900 Populus trichocarpa POPTR_0003s18900 I 0.687
29686.m000890 Ricinus communis 29686.m000890 I 0.687
MTR_3g011610 Medicago truncatula MTR_3g011610 I 0.684
MTR_8g042410 Medicago truncatula MTR_8g042410 I 0.683
29785.m000932 Ricinus communis 29785.m000932 I 0.683
Aquca_014_00928 Aquilegia coerulea Aquca_014_00928 I 0.683
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I 0.680
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I 0.680
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I 0.680
Ca_21739 Cicer arietinum Ca_21739 I 0.680
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.679
Ca_20081 Cicer arietinum Ca_20081 I 0.678
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.676
Thhalv10013329m.g Eutrema salsugineum Thhalv10013329m.g I 0.676
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.674
GLYMA15G35860 Glycine max GLYMA15G35860 I 0.674
Carubv10000715m.g Capsella rubella Carubv10000715m.g I 0.673
Cagra.2117s0052 Capsella grandiflora Cagra.2117s0052 I 0.673
MTR_3g052430 Medicago truncatula MTR_3g052430 I 0.673
Bostr.13129s0364 Boechera stricta Bostr.13129s0364 I 0.673
Sb03g037680 Sorghum bicolor Sb03g037680 I 0.673
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I 0.671
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I 0.671
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I 0.671
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I 0.671
GLYMA13G04031 Glycine max GLYMA13G04031 I 0.671
Lus10026142.g Linum usitatissimum Lus10026142.g I 0.670
GSMUA_AchrUn_randomG15100_001 Musa acuminata GSMUA_AchrUn_randomG15100_001 I 0.670
Lus10008685.g Linum usitatissimum Lus10008685.g I 0.670
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.669
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.669
ATMYB65 Arabidopsis thaliana AT3G11440 D 0.667
ATMYB65 Arabidopsis lyrata fgenesh2_kg.3__1182__AT3G11440.1 I 0.667
Bo5g136570 Brassica oleracea Bo5g136570 I 0.667
Cagra.1655s0026 Capsella grandiflora Cagra.1655s0026 I 0.667
Carubv10013393m.g Capsella rubella Carubv10013393m.g I 0.667
Bostr.19424s1075 Boechera stricta Bostr.19424s1075 I 0.667
Bra034842 Brassica rapa Bra034842 I 0.667
SapurV1A.1951s0020 Salix purpurea SapurV1A.1951s0020 I 0.666
PDK_20s1831811g001 Phoenix dactylifera PDK_20s1831811g001 I 0.666
MYB33 Arabidopsis lyrata fgenesh2_kg.6__546__AT5G06100.3 I 0.666
orange1.1g011938m.g Citrus sinensis orange1.1g011938m.g I 0.666
Ciclev10000756m.g Citrus clementina Ciclev10000756m.g I 0.666
Cla013880 Citrullus lanatus Cla013880 I 0.665
cassava44767.m1 Manihot esculenta cassava44767.m1 I 0.662
Thhalv10002011m.g Eutrema salsugineum Thhalv10002011m.g I 0.662
POPTR_0009s02380 Populus trichocarpa POPTR_0009s02380 I 0.662
Thhalv10020455m.g Eutrema salsugineum Thhalv10020455m.g I 0.661