CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla007228
(
Citrullus lanatus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cla007228
T283175_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla007228
Myb
4
53
RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPTPLHRDPKSCLERWKNYL
Cla007228
Myb
59
104
KGSLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFK
Links
Other
Myb/SANT
family TFs
Other
Citrullus lanatus
TFs
82 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.031620
Cucumis sativus
Cucsa.031620
N
0.886
TCM_019507
Theobroma cacao
TCM_019507
N
0.872
30167.m000852
Ricinus communis
30167.m000852
N
0.863
Ciclev10011915m.g
Citrus clementina
Ciclev10011915m.g
N
0.848
mgf026496m
Mimulus guttatus
mgf026496m
N
0.847
AMTR_s00044p00233260
Amborella trichopoda
AMTR_s00044p00233260
N
0.833
MDP0000252887
Malus domestica
MDP0000252887
N
0.833
gene10329-v1.0-hybrid
Fragaria vesca
gene10329-v1.0-hybrid
N
0.827
PK14097.1
Cannabis sativa
PK14097.1
N
0.823
gene08535-v1.0-hybrid
Fragaria vesca
gene08535-v1.0-hybrid
N
0.822
gene18421-v1.0-hybrid
Fragaria vesca
gene18421-v1.0-hybrid
N
0.822
POPTR_0004s10250
Populus trichocarpa
POPTR_0004s10250
N
0.816
POPTR_0006s08610
Populus trichocarpa
POPTR_0006s08610
N
0.814
SapurV1A.0001s1780
Salix purpurea
SapurV1A.0001s1780
N
0.814
VIT_14s0083g00120
Vitis vinifera
VIT_14s0083g00120
N
0.809
Ciclev10012089m.g
Citrus clementina
Ciclev10012089m.g
N
0.806
orange1.1g018768m.g
Citrus sinensis
orange1.1g018768m.g
N
0.806
PGSC0003DMG400008834
Solanum tuberosum
PGSC0003DMG400008834
N
0.806
Solyc09g010840.1
Solanum lycopersicum
Solyc09g010840.1
N
0.806
29767.m000199
Ricinus communis
29767.m000199
N
0.805
Pm002699
Prunus mume
Pm002699
N
0.805
VIT_08s0007g00410
Vitis vinifera
VIT_08s0007g00410
N
0.805
cassava35798.valid.m1
Manihot esculenta
cassava35798.valid.m1
N
0.805
GLYMA03G19030
Glycine max
GLYMA03G19030
N
0.805
MDP0000708334
Malus domestica
MDP0000708334
N
0.805
Aquca_027_00369
Aquilegia coerulea
Aquca_027_00369
N
0.805
PRUPE_ppa007753mg
Prunus persica
PRUPE_ppa007753mg
N
0.805
28603.m000172
Ricinus communis
28603.m000172
N
0.805
GLYMA18G26600
Glycine max
GLYMA18G26600
N
0.802
MDP0000282792
Malus domestica
MDP0000282792
N
0.802
POPTR_0017s13950
Populus trichocarpa
POPTR_0017s13950
N
0.801
Lus10024392.g
Linum usitatissimum
Lus10024392.g
N
0.801
chr3.LjT11G09.150.nc
Lotus japonicus
chr3.LjT11G09.150.nc
N
0.801
fgenesh1_pm.C_scaffold_4001520
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4001520
N
0.799
Cagra.18121s0004
Capsella grandiflora
Cagra.18121s0004
N
0.799
Bostr.23794s0314
Boechera stricta
Bostr.23794s0314
N
0.799
Bo3g031880
Brassica oleracea
Bo3g031880
N
0.799
AS1
Arabidopsis thaliana
AT2G37630
N
0.799
Thhalv10016830m.g
Eutrema salsugineum
Thhalv10016830m.g
N
0.799
Bra000011
Brassica rapa
Bra000011
N
0.799
Bo4g030340
Brassica oleracea
Bo4g030340
N
0.799
evm.TU.supercontig_333.1
Carica papaya
evm.TU.supercontig_333.1
N
0.799
Bra005177
Brassica rapa
Bra005177
N
0.799
scaffold_402408.1
Arabidopsis lyrata
scaffold_402408.1
N
0.799
Gorai.012G104100
Gossypium raimondii
Gorai.012G104100
N
0.795
Carubv10023471m.g
Capsella rubella
Carubv10023471m.g
N
0.795
LPERR12G13690
Leersia perrieri
LPERR12G13690
N
0.795
OGLUM12G18010
Oryza glumaepatula
OGLUM12G18010
N
0.794
Eucgr.K03130
Eucalyptus grandis
Eucgr.K03130
N
0.794
OBART12G16450
Oryza barthii
OBART12G16450
N
0.794
ORGLA12G0144700
Oryza glaberrima
ORGLA12G0144700
N
0.794
OMERI08G15890
Oryza meridionalis
OMERI08G15890
N
0.794
BGIOSGA037216
Oryza indica
BGIOSGA037216
N
0.794
ONIVA02G22170
Oryza nivara
ONIVA02G22170
N
0.794
OS12G0572000
Oryza sativa
OS12G0572000
N
0.794
ORUFI12G18280
Oryza rufipogon
ORUFI12G18280
N
0.794
Traes_5BS_E635B0A281
Triticum aestivum
Traes_5BS_E635B0A281
N
0.793
Traes_5DS_8F3BD4450
Triticum aestivum
Traes_5DS_8F3BD4450
N
0.793
OB12G23330
Oryza brachyantha
OB12G23330
N
0.793
TRIUR3_13997
Triticum urartu
TRIUR3_13997
N
0.793
BRADI4G03970
Brachypodium distachyon
BRADI4G03970
N
0.791
Sb08g018840
Sorghum bicolor
Sb08g018840
N
0.791
GRMZM2G403620
Zea mays
GRMZM2G403620
N
0.791
TCM_021932
Theobroma cacao
TCM_021932
N
0.791
Pavir.Cb00486
Panicum virgatum
Pavir.Cb00486
N
0.791
OPUNC12G14950
Oryza punctata
OPUNC12G14950
N
0.788
BGIOSGA035973
Oryza indica
BGIOSGA035973
N
0.783
GSMUA_Achr9G19380_001
Musa acuminata
GSMUA_Achr9G19380_001
N
0.781
Lus10025355.g
Linum usitatissimum
Lus10025355.g
N
0.775
chr3.LjT11G09.160.nc
Lotus japonicus
chr3.LjT11G09.160.nc
N
0.769
SapurV1A.0101s0440
Salix purpurea
SapurV1A.0101s0440
N
0.768
GLYMA07G15850
Glycine max
GLYMA07G15850
N
0.766
MTR_7g061550
Medicago truncatula
MTR_7g061550
N
0.766
Ca_21130
Cicer arietinum
Ca_21130
N
0.766
GLYMA18G39771
Glycine max
GLYMA18G39771
N
0.766
GSMUA_Achr9G03320_001
Musa acuminata
GSMUA_Achr9G03320_001
N
0.759
GSMUA_Achr5G29070_001
Musa acuminata
GSMUA_Achr5G29070_001
N
0.757
GSMUA_Achr7G10550_001
Musa acuminata
GSMUA_Achr7G10550_001
N
0.756
GSMUA_Achr9G28330_001
Musa acuminata
GSMUA_Achr9G28330_001
N
0.752
mgf026281m
Mimulus guttatus
mgf026281m
N
0.732
SELMODRAFT_270481
Selaginella moellendorffii
SELMODRAFT_270481
N
0.686
SELMODRAFT_140962
Selaginella moellendorffii
SELMODRAFT_140962
N
0.686