CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla008455
(
Citrullus lanatus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cla008455
T283190_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK17526.1
M02353_2.00
Cannabis sativa
NNTTATCCAN
NTGGATAANN
PBM
Weirauch et al.(2014)
pTH9588
0.672
0.857
fgenesh1_pg.scaffold_70000111
M02342_2.00
Physcomitrella patens
NNHNATCBN
NVGATNDNN
PBM
Weirauch et al.(2014)
pTH8492
0.672
0.829
KUA1
M02312_2.00
Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN
PBM
Weirauch et al.(2014)
pTH7647
0.663
0.800
KUA1
M07136_2.00
Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW
Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a
0.663
0.800
KUA1
M07137_2.00
Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD
Dap-seq
OMalley et al.(2016)
At5g47390_col_b
0.663
0.800
PK23829.1
M02355_2.00
Cannabis sativa
VTTATCCD
HGGATAAB
PBM
Weirauch et al.(2014)
pTH9592
0.661
0.829
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla008455
Myb
89
124
VNASEKVGKGDWRGISRNFVKTRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Citrullus lanatus
TFs
225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400009570
Solanum tuberosum
PGSC0003DMG400009570
I
0.821
Aquca_004_00370
Aquilegia coerulea
Aquca_004_00370
I
0.818
chr4.CM0244.480.nc
Lotus japonicus
chr4.CM0244.480.nc
I
0.808
LjSGA_143592.1
Lotus japonicus
LjSGA_143592.1
I
0.808
cassava4263.m1
Manihot esculenta
cassava4263.m1
I
0.782
PGSC0003DMG400027126
Solanum tuberosum
PGSC0003DMG400027126
I
0.782
mgf017789m
Mimulus guttatus
mgf017789m
I
0.782
OB01G15640
Oryza brachyantha
OB01G15640
I
0.771
MTR_1g033620
Medicago truncatula
MTR_1g033620
I
0.764
F775_08891
Aegilops tauschii
F775_08891
I
0.764
PGSC0003DMG400020344
Solanum tuberosum
PGSC0003DMG400020344
I
0.764
Gorai.008G233500
Gossypium raimondii
Gorai.008G233500
I
0.761
MLOC_76271
Hordeum vulgare
MLOC_76271
I
0.753
BRADI2G05590
Brachypodium distachyon
BRADI2G05590
I
0.753
SapurV1A.1882s0030
Salix purpurea
SapurV1A.1882s0030
I
0.749
MDP0000233793
Malus domestica
MDP0000233793
I
0.730
Traes_1AL_1360F98E7
Triticum aestivum
Traes_1AL_1360F98E7
N
0.729
GLYMA05G36290
Glycine max
GLYMA05G36290
I
0.725
TRIUR3_09932
Triticum urartu
TRIUR3_09932
I
0.725
OMERI01G05960
Oryza meridionalis
OMERI01G05960
I
0.713
TRIUR3_18966
Triticum urartu
TRIUR3_18966
I
0.704
Gorai.004G196500
Gossypium raimondii
Gorai.004G196500
I
0.704
OBART04G08050
Oryza barthii
OBART04G08050
I
0.699
Traes_3AL_891566958
Triticum aestivum
Traes_3AL_891566958
I
0.699
LjB06N21.60.nd
Lotus japonicus
LjB06N21.60.nd
N
0.698
PGSC0003DMG400020730
Solanum tuberosum
PGSC0003DMG400020730
I
0.696
PDK_20s1532501g001
Phoenix dactylifera
PDK_20s1532501g001
I
0.694
Gorai.008G147400
Gossypium raimondii
Gorai.008G147400
I
0.694
evm.TU.supercontig_35.12
Carica papaya
evm.TU.supercontig_35.12
I
0.694
Cucsa.285620
Cucumis sativus
Cucsa.285620
I
0.694
Lus10004248.g
Linum usitatissimum
Lus10004248.g
I
0.694
Sb03g006450
Sorghum bicolor
Sb03g006450
I
0.694
PGSC0003DMG400024572
Solanum tuberosum
PGSC0003DMG400024572
I
0.694
MTR_4g015130
Medicago truncatula
MTR_4g015130
I
0.689
Cucsa.094040
Cucumis sativus
Cucsa.094040
I
0.686
Aquca_001_00103
Aquilegia coerulea
Aquca_001_00103
I
0.686
GLYMA06G19960
Glycine max
GLYMA06G19960
I
0.684
MTR_4g107230
Medicago truncatula
MTR_4g107230
I
0.684
GLYMA04G34720
Glycine max
GLYMA04G34720
I
0.684
Ca_03888
Cicer arietinum
Ca_03888
I
0.683
PGSC0003DMG400026442
Solanum tuberosum
PGSC0003DMG400026442
I
0.682
Solyc12g044610.1
Solanum lycopersicum
Solyc12g044610.1
I
0.682
Traes_2AL_C13CD3ECB
Triticum aestivum
Traes_2AL_C13CD3ECB
I
0.682
Traes_7DS_C6BEE3896
Triticum aestivum
Traes_7DS_C6BEE3896
I
0.682
TRIUR3_30912
Triticum urartu
TRIUR3_30912
I
0.682
ORGLA03G0402100
Oryza glaberrima
ORGLA03G0402100
I
0.682
OLONG_027538
Oryza longistaminata
OLONG_027538
I
0.682
Solyc07g026680.2
Solanum lycopersicum
Solyc07g026680.2
I
0.676
Gorai.003G175300
Gossypium raimondii
Gorai.003G175300
I
0.673
Ca_05889
Cicer arietinum
Ca_05889
I
0.672
Ca_17597
Cicer arietinum
Ca_17597
I
0.672
orange1.1g021351m.g
Citrus sinensis
orange1.1g021351m.g
I
0.672
VIT_11s0016g02410
Vitis vinifera
VIT_11s0016g02410
I
0.672
VIT_17s0000g07510
Vitis vinifera
VIT_17s0000g07510
I
0.672
Cla000916
Citrullus lanatus
Cla000916
I
0.672
Pm006358
Prunus mume
Pm006358
I
0.672
MDP0000938309
Malus domestica
MDP0000938309
I
0.672
MDP0000758053
Malus domestica
MDP0000758053
I
0.672
29794.m003333
Ricinus communis
29794.m003333
I
0.672
29736.m002089
Ricinus communis
29736.m002089
I
0.672
Pm024648
Prunus mume
Pm024648
I
0.672
VIT_01s0026g01050
Vitis vinifera
VIT_01s0026g01050
I
0.672
SapurV1A.0007s0060
Salix purpurea
SapurV1A.0007s0060
I
0.672
PK17526.1
Cannabis sativa
PK17526.1
D
0.672
Thhalv10019007m.g
Eutrema salsugineum
Thhalv10019007m.g
I
0.672
chr2.CM0028.230.nd
Lotus japonicus
chr2.CM0028.230.nd
I
0.672
LjSGA_030087.1
Lotus japonicus
LjSGA_030087.1
I
0.672
TCM_037687
Theobroma cacao
TCM_037687
I
0.672
Traes_3AS_6626D4A69
Triticum aestivum
Traes_3AS_6626D4A69
I
0.672
AMTR_s00074p00097250
Amborella trichopoda
AMTR_s00074p00097250
I
0.672
MDP0000230601
Malus domestica
MDP0000230601
I
0.672
SapurV1A.0086s0190
Salix purpurea
SapurV1A.0086s0190
I
0.672
SapurV1A.0113s0280
Salix purpurea
SapurV1A.0113s0280
I
0.672
SapurV1A.1274s0030
Salix purpurea
SapurV1A.1274s0030
I
0.672
orange1.1g022562m.g
Citrus sinensis
orange1.1g022562m.g
I
0.672
Lus10036652.g
Linum usitatissimum
Lus10036652.g
I
0.672
fgenesh1_pg.scaffold_70000111
Physcomitrella patens
fgenesh1_pg.scaffold_70000111
D
0.672
gene00738-v1.0-hybrid
Fragaria vesca
gene00738-v1.0-hybrid
I
0.672
fgenesh1_pg.scaffold_66000048
Physcomitrella patens
fgenesh1_pg.scaffold_66000048
I
0.672
fgenesh1_pg.scaffold_66000046
Physcomitrella patens
fgenesh1_pg.scaffold_66000046
I
0.672
estExt_fgenesh1_pg.C_1880060
Physcomitrella patens
estExt_fgenesh1_pg.C_1880060
I
0.672
Aquca_002_00384
Aquilegia coerulea
Aquca_002_00384
I
0.672
evm.TU.supercontig_5.314
Carica papaya
evm.TU.supercontig_5.314
I
0.672
Ciclev10021454m.g
Citrus clementina
Ciclev10021454m.g
I
0.672
Ciclev10032167m.g
Citrus clementina
Ciclev10032167m.g
I
0.672
TCM_037276
Theobroma cacao
TCM_037276
I
0.672
Eucgr.K02897
Eucalyptus grandis
Eucgr.K02897
I
0.672
Bostr.10273s0355
Boechera stricta
Bostr.10273s0355
I
0.672
Gorai.007G034000
Gossypium raimondii
Gorai.007G034000
I
0.672
Cucsa.361050
Cucumis sativus
Cucsa.361050
I
0.672
cassava17572.valid.m1
Manihot esculenta
cassava17572.valid.m1
I
0.672
cassava22868.valid.m1
Manihot esculenta
cassava22868.valid.m1
I
0.672
30147.m014028
Ricinus communis
30147.m014028
I
0.672
Lus10027781.g
Linum usitatissimum
Lus10027781.g
I
0.672
Lus10030813.g
Linum usitatissimum
Lus10030813.g
I
0.672
cassava23010.valid.m1
Manihot esculenta
cassava23010.valid.m1
I
0.672
cassava23011.valid.m1
Manihot esculenta
cassava23011.valid.m1
I
0.672
Gorai.007G378300
Gossypium raimondii
Gorai.007G378300
I
0.672
Cucsa.098110
Cucumis sativus
Cucsa.098110
I
0.672
Gorai.010G081800
Gossypium raimondii
Gorai.010G081800
I
0.672
Lus10013289.g
Linum usitatissimum
Lus10013289.g
I
0.672
Eucgr.B02575
Eucalyptus grandis
Eucgr.B02575
I
0.672
Traes_3DS_8AF1A10AB
Triticum aestivum
Traes_3DS_8AF1A10AB
I
0.672
PGSC0003DMG400033030
Solanum tuberosum
PGSC0003DMG400033030
I
0.672
PGSC0003DMG400000340
Solanum tuberosum
PGSC0003DMG400000340
I
0.672
POPTR_0006s15480
Populus trichocarpa
POPTR_0006s15480
I
0.672
POPTR_0008s19610
Populus trichocarpa
POPTR_0008s19610
I
0.672
PRUPE_ppa008539mg
Prunus persica
PRUPE_ppa008539mg
I
0.672
POPTR_0010s04860
Populus trichocarpa
POPTR_0010s04860
I
0.672
fgenesh2_kg.2__1257__AT1G70000.1
Arabidopsis lyrata
fgenesh2_kg.2__1257__AT1G70000.1
I
0.672
GLYMA01G04530
Glycine max
GLYMA01G04530
I
0.672
MLOC_79329
Hordeum vulgare
MLOC_79329
I
0.672
TCM_013524
Theobroma cacao
TCM_013524
I
0.672
MLOC_20277
Hordeum vulgare
MLOC_20277
I
0.672
GSMUA_Achr5G09240_001
Musa acuminata
GSMUA_Achr5G09240_001
I
0.672
GLYMA02G03020
Glycine max
GLYMA02G03020
I
0.672
GLYMA08G03330
Glycine max
GLYMA08G03330
I
0.672
PRUPE_ppa009283mg
Prunus persica
PRUPE_ppa009283mg
I
0.672
PGSC0003DMG400001913
Solanum tuberosum
PGSC0003DMG400001913
I
0.672
Solyc06g071230.2
Solanum lycopersicum
Solyc06g071230.2
I
0.672
AT1G70000
Arabidopsis thaliana
AT1G70000
I
0.672
Solyc12g008800.1
Solanum lycopersicum
Solyc12g008800.1
I
0.672
TCM_010118
Theobroma cacao
TCM_010118
I
0.672
Solyc03g113620.2
Solanum lycopersicum
Solyc03g113620.2
I
0.672
Solyc04g005100.2
Solanum lycopersicum
Solyc04g005100.2
I
0.672
Thhalv10008346m.g
Eutrema salsugineum
Thhalv10008346m.g
I
0.669
Bo8g068220
Brassica oleracea
Bo8g068220
I
0.669
Bra016530
Brassica rapa
Bra016530
I
0.669
Bostr.7128s0505
Boechera stricta
Bostr.7128s0505
I
0.669
ONIVA04G06580
Oryza nivara
ONIVA04G06580
I
0.668
BGIOSGA015321
Oryza indica
BGIOSGA015321
I
0.668
SELMODRAFT_84280
Selaginella moellendorffii
SELMODRAFT_84280
I
0.666
SapurV1A.0138s0010
Salix purpurea
SapurV1A.0138s0010
I
0.665
SapurV1A.0161s0200
Salix purpurea
SapurV1A.0161s0200
I
0.665
SapurV1A.1673s0010
Salix purpurea
SapurV1A.1673s0010
I
0.665
GSMUA_Achr7G06880_001
Musa acuminata
GSMUA_Achr7G06880_001
I
0.664
gw1.89.65.1
Physcomitrella patens
gw1.89.65.1
I
0.664
OGLUM08G03020
Oryza glumaepatula
OGLUM08G03020
I
0.664
ONIVA06G02390
Oryza nivara
ONIVA06G02390
I
0.664
LPERR08G03010
Leersia perrieri
LPERR08G03010
I
0.664
Eucgr.B00377
Eucalyptus grandis
Eucgr.B00377
I
0.664
OB08G13080
Oryza brachyantha
OB08G13080
I
0.664
OPUNC08G02750
Oryza punctata
OPUNC08G02750
I
0.664
Gorai.009G030900
Gossypium raimondii
Gorai.009G030900
I
0.664
OBART08G03010
Oryza barthii
OBART08G03010
I
0.664
Solyc08g065380.2
Solanum lycopersicum
Solyc08g065380.2
I
0.664
BGIOSGA027987
Oryza indica
BGIOSGA027987
I
0.664
ORUFI08G03370
Oryza rufipogon
ORUFI08G03370
I
0.664
30147.m014337
Ricinus communis
30147.m014337
I
0.664
OS08G0151000
Oryza sativa
OS08G0151000
I
0.664
chr4.CM0004.450.nd
Lotus japonicus
chr4.CM0004.450.nd
I
0.664
29912.m005387
Ricinus communis
29912.m005387
I
0.664
Cla010879
Citrullus lanatus
Cla010879
I
0.664
ORGLA08G0023800
Oryza glaberrima
ORGLA08G0023800
I
0.664
MTR_6g092540
Medicago truncatula
MTR_6g092540
I
0.663
gene11419-v1.0-hybrid
Fragaria vesca
gene11419-v1.0-hybrid
I
0.663
Bra012665
Brassica rapa
Bra012665
I
0.663
gene09510-v1.0-hybrid
Fragaria vesca
gene09510-v1.0-hybrid
I
0.663
Bo2g132340
Brassica oleracea
Bo2g132340
I
0.663
Thhalv10025432m.g
Eutrema salsugineum
Thhalv10025432m.g
I
0.663
evm.TU.supercontig_2092.1
Carica papaya
evm.TU.supercontig_2092.1
I
0.663
MDP0000537549
Malus domestica
MDP0000537549
I
0.663
MDP0000875621
Malus domestica
MDP0000875621
I
0.663
LjSGA_014616.1
Lotus japonicus
LjSGA_014616.1
I
0.663
Bo7g105100
Brassica oleracea
Bo7g105100
I
0.663
KUA1
Arabidopsis thaliana
AT5G47390
D
0.663
Thhalv10000932m.g
Eutrema salsugineum
Thhalv10000932m.g
I
0.663
Bra022127
Brassica rapa
Bra022127
I
0.663
chr2.CM0373.230.nd
Lotus japonicus
chr2.CM0373.230.nd
I
0.663
Carubv10026634m.g
Capsella rubella
Carubv10026634m.g
I
0.663
Pm027228
Prunus mume
Pm027228
I
0.663
mgf003276m
Mimulus guttatus
mgf003276m
I
0.663
Bostr.14419s0032
Boechera stricta
Bostr.14419s0032
I
0.663
POPTR_0015s08020
Populus trichocarpa
POPTR_0015s08020
I
0.663
PRUPE_ppa008425mg
Prunus persica
PRUPE_ppa008425mg
I
0.663
scaffold_800056.1
Arabidopsis lyrata
scaffold_800056.1
I
0.663
Ca_12767
Cicer arietinum
Ca_12767
I
0.663
Ca_15538
Cicer arietinum
Ca_15538
I
0.663
Cagra.10840s0008
Capsella grandiflora
Cagra.10840s0008
I
0.663
e_gw1.89.66.1
Physcomitrella patens
e_gw1.89.66.1
I
0.663
Cagra.1415s0002
Capsella grandiflora
Cagra.1415s0002
I
0.663
Carubv10020813m.g
Capsella rubella
Carubv10020813m.g
I
0.663
PRUPE_ppa010092mg
Prunus persica
PRUPE_ppa010092mg
I
0.662
MDP0000297148
Malus domestica
MDP0000297148
I
0.662
MDP0000162533
Malus domestica
MDP0000162533
I
0.662
gene21159-v1.0-hybrid
Fragaria vesca
gene21159-v1.0-hybrid
I
0.662
Pm019550
Prunus mume
Pm019550
I
0.662
OBART01G05710
Oryza barthii
OBART01G05710
I
0.661
MYBS3
Oryza sativa
OS10G0561400
I
0.661
OGLUM10G18630
Oryza glumaepatula
OGLUM10G18630
I
0.661
Sb01g029020
Sorghum bicolor
Sb01g029020
I
0.661
OLONG_012642
Oryza longistaminata
OLONG_012642
I
0.661
OLONG_013887
Oryza longistaminata
OLONG_013887
I
0.661
Sb03g003270
Sorghum bicolor
Sb03g003270
I
0.661
Traes_1DL_8398893D8
Triticum aestivum
Traes_1DL_8398893D8
I
0.661
BGIOSGA002232
Oryza indica
BGIOSGA002232
I
0.661
Traes_1BL_B7F04D24D
Triticum aestivum
Traes_1BL_B7F04D24D
I
0.661
Traes_1AL_297FBF3A3
Triticum aestivum
Traes_1AL_297FBF3A3
I
0.661
Si036696m.g
Setaria italica
Si036696m.g
I
0.661
TRIUR3_06499
Triticum urartu
TRIUR3_06499
I
0.661
OS01G0187900
Oryza sativa
OS01G0187900
I
0.661
OBART10G18550
Oryza barthii
OBART10G18550
I
0.661
Si001941m.g
Setaria italica
Si001941m.g
I
0.661
PK23829.1
Cannabis sativa
PK23829.1
D
0.661
ORUFI01G06200
Oryza rufipogon
ORUFI01G06200
I
0.661
ONIVA10G21060
Oryza nivara
ONIVA10G21060
I
0.661
OB10G25650
Oryza brachyantha
OB10G25650
I
0.661
GRMZM5G813892
Zea mays
GRMZM5G813892
I
0.661
GRMZM2G400489
Zea mays
GRMZM2G400489
I
0.661
LPERR01G05380
Leersia perrieri
LPERR01G05380
I
0.661
ONIVA01G06510
Oryza nivara
ONIVA01G06510
I
0.661
OMERI08G00440
Oryza meridionalis
OMERI08G00440
I
0.661
MLOC_10528
Hordeum vulgare
MLOC_10528
I
0.661
LPERR10G14380
Leersia perrieri
LPERR10G14380
I
0.661
OPUNC01G05570
Oryza punctata
OPUNC01G05570
I
0.661
GRMZM2G034110
Zea mays
GRMZM2G034110
I
0.661
Pavir.Ia02215
Panicum virgatum
Pavir.Ia02215
I
0.661
Pavir.Ib02319
Panicum virgatum
Pavir.Ib02319
I
0.661
BRADI3G33400
Brachypodium distachyon
BRADI3G33400
I
0.661
Pavir.Ea00264
Panicum virgatum
Pavir.Ea00264
I
0.661
ORGLA10G0136800
Oryza glaberrima
ORGLA10G0136800
I
0.661
OPUNC10G16890
Oryza punctata
OPUNC10G16890
I
0.661
ORGLA01G0053500
Oryza glaberrima
ORGLA01G0053500
I
0.661
OGLUM01G06250
Oryza glumaepatula
OGLUM01G06250
I
0.661
ORUFI10G19730
Oryza rufipogon
ORUFI10G19730
I
0.661