Cla008926 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla008926 T283195_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN

NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.857 0.915
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN

NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.698 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla008926 Myb 316 366

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29983.m003131 Ricinus communis 29983.m003131 I 0.678
30054.m000786 Ricinus communis 30054.m000786 I 0.851
AMTR_s00058p00133630 Amborella trichopoda AMTR_s00058p00133630 I 0.678
AMTR_s00149p00035260 Amborella trichopoda AMTR_s00149p00035260 I 0.756
Aquca_044_00072 Aquilegia coerulea Aquca_044_00072 I 0.819
GPRI1 Arabidopsis thaliana AT2G20570 D 0.698
APRR2 Arabidopsis thaliana AT4G18020 D 0.857
GLK2 Arabidopsis thaliana AT5G44190 I 0.729
Bo1g019180 Brassica oleracea Bo1g019180 I 0.834
Bo7g067200 Brassica oleracea Bo7g067200 I 0.667
Bo7g105690 Brassica oleracea Bo7g105690 I 0.834
Bostr.30275s0270 Boechera stricta Bostr.30275s0270 I 0.834
Bostr.3148s0040 Boechera stricta Bostr.3148s0040 I 0.729
Bostr.7903s0106 Boechera stricta Bostr.7903s0106 I 0.698
Bra012623 Brassica rapa Bra012623 I 0.834
Bra013277 Brassica rapa Bra013277 I 0.834
Bra013278 Brassica rapa Bra013278 I 0.834
Bra013279 Brassica rapa Bra013279 I 0.834
Bra033726 Brassica rapa Bra033726 I 0.667
Cagra.0381s0008 Capsella grandiflora Cagra.0381s0008 I 0.729
Cagra.1595s0002 Capsella grandiflora Cagra.1595s0002 I 0.768
Cagra.2516s0014 Capsella grandiflora Cagra.2516s0014 I 0.698
Carubv10004540m.g Capsella rubella Carubv10004540m.g I 0.768
Carubv10014114m.g Capsella rubella Carubv10014114m.g I 0.698
Carubv10026528m.g Capsella rubella Carubv10026528m.g I 0.729
cassava2466.valid.m1 Manihot esculenta cassava2466.valid.m1 I 0.823
cassava42047.valid.m1 Manihot esculenta cassava42047.valid.m1 I 0.760
cassava42048.valid.m1 Manihot esculenta cassava42048.valid.m1 I 0.760
cassava43649.valid.m1 Manihot esculenta cassava43649.valid.m1 I 0.678
cassava43650.valid.m1 Manihot esculenta cassava43650.valid.m1 I 0.678
cassava9823.m1 Manihot esculenta cassava9823.m1 I 0.678
Ca_02285 Cicer arietinum Ca_02285 I 0.786
Ca_12825 Cicer arietinum Ca_12825 I 0.778
Ca_24009 Cicer arietinum Ca_24009 I 0.719
chr2.CM0021.770.nc Lotus japonicus chr2.CM0021.770.nc I 0.768
chr4.CM0831.100.nd Lotus japonicus chr4.CM0831.100.nd I 0.778
Ciclev10015266m.g Citrus clementina Ciclev10015266m.g I 0.678
Ciclev10031120m.g Citrus clementina Ciclev10031120m.g I 0.876
Cla003791 Citrullus lanatus Cla003791 I 0.698
Cla016403 Citrullus lanatus Cla016403 I 0.731
Cucsa.087530 Cucumis sativus Cucsa.087530 I 0.698
Cucsa.313480 Cucumis sativus Cucsa.313480 I 0.735
Cucsa.321580 Cucumis sativus Cucsa.321580 I 0.909
estExt_gwp_gw1.C_310256 Physcomitrella patens estExt_gwp_gw1.C_310256 I 0.678
Eucgr.E00308 Eucalyptus grandis Eucgr.E00308 I 0.868
Eucgr.K01056 Eucalyptus grandis Eucgr.K01056 I 0.725
evm.TU.supercontig_6.428 Carica papaya evm.TU.supercontig_6.428 I 0.816
fgenesh1_pm.scaffold_311000005 Physcomitrella patens fgenesh1_pm.scaffold_311000005 I 0.678
GPRI1 Arabidopsis lyrata fgenesh2_kg.3__3588__AT2G20570.1 I 0.698
APRR2 Arabidopsis lyrata fgenesh2_kg.7__2503__AT4G18020.2 I 0.857
fgenesh2_kg.8__391__AT5G44190.1 Arabidopsis lyrata fgenesh2_kg.8__391__AT5G44190.1 I 0.729
gene10484-v1.0-hybrid Fragaria vesca gene10484-v1.0-hybrid I 0.876
gene17750-v1.0-hybrid Fragaria vesca gene17750-v1.0-hybrid I 0.678
GLYMA01G40900 Glycine max GLYMA01G40900 I 0.768
GLYMA05G06070 Glycine max GLYMA05G06070 I 0.738
GLYMA11G04441 Glycine max GLYMA11G04441 I 0.768
GLYMA17G16360 Glycine max GLYMA17G16360 I 0.775
Gorai.002G020300 Gossypium raimondii Gorai.002G020300 I 0.678
Gorai.003G180100 Gossypium raimondii Gorai.003G180100 I 0.747
Gorai.004G188300 Gossypium raimondii Gorai.004G188300 I 0.752
Gorai.008G228800 Gossypium raimondii Gorai.008G228800 I 0.786
Gorai.012G126600 Gossypium raimondii Gorai.012G126600 I 0.678
GSMUA_Achr11G17740_001 Musa acuminata GSMUA_Achr11G17740_001 I 0.756
GSMUA_Achr2G18200_001 Musa acuminata GSMUA_Achr2G18200_001 I 0.703
Lus10003013.g Linum usitatissimum Lus10003013.g I 0.798
Lus10011044.g Linum usitatissimum Lus10011044.g I 0.859
Lus10018649.g Linum usitatissimum Lus10018649.g I 0.698
Lus10030938.g Linum usitatissimum Lus10030938.g I 0.737
Lus10033642.g Linum usitatissimum Lus10033642.g I 0.698
Lus10039883.g Linum usitatissimum Lus10039883.g I 0.698
Lus10040109.g Linum usitatissimum Lus10040109.g I 0.839
MDP0000225179 Malus domestica MDP0000225179 I 0.678
MDP0000237396 Malus domestica MDP0000237396 I 0.861
MDP0000248863 Malus domestica MDP0000248863 I 0.812
MDP0000526864 Malus domestica MDP0000526864 I 0.678
MTR_4g098870 Medicago truncatula MTR_4g098870 I 0.771
MTR_5g014040 Medicago truncatula MTR_5g014040 I 0.752
orange1.1g008254m.g Citrus sinensis orange1.1g008254m.g I 0.876
orange1.1g013528m.g Citrus sinensis orange1.1g013528m.g I 0.678
PDK_20s1585631g001 Phoenix dactylifera PDK_20s1585631g001 I 0.845
PGSC0003DMG400024217 Solanum tuberosum PGSC0003DMG400024217 I 0.778
PGSC0003DMG400026587 Solanum tuberosum PGSC0003DMG400026587 I 0.699
PK19826.1 Cannabis sativa PK19826.1 I 0.876
PK27491.1 Cannabis sativa PK27491.1 I 0.678
Pm014123 Prunus mume Pm014123 I 0.678
Pm014733 Prunus mume Pm014733 I 0.876
POPTR_0001s02910 Populus trichocarpa POPTR_0001s02910 I 0.816
POPTR_0003s08600 Populus trichocarpa POPTR_0003s08600 I 0.762
POPTR_0007s01230 Populus trichocarpa POPTR_0007s01230 I 0.678
POPTR_0017s04720 Populus trichocarpa POPTR_0017s04720 I 0.678
PRUPE_ppa004161mg Prunus persica PRUPE_ppa004161mg I 0.876
PRUPE_ppa014599mg Prunus persica PRUPE_ppa014599mg I 0.678
SapurV1A.0118s0260 Salix purpurea SapurV1A.0118s0260 I 0.678
SapurV1A.0132s0010 Salix purpurea SapurV1A.0132s0010 I 0.798
SapurV1A.0693s0070 Salix purpurea SapurV1A.0693s0070 I 0.678
SapurV1A.1296s0050 Salix purpurea SapurV1A.1296s0050 I 0.804
SapurV1A.1950s0030 Salix purpurea SapurV1A.1950s0030 I 0.678
SELMODRAFT_428906 Selaginella moellendorffii SELMODRAFT_428906 I 0.786
Solyc06g061030.2 Solanum lycopersicum Solyc06g061030.2 I 0.699
Solyc08g077230.2 Solanum lycopersicum Solyc08g077230.2 I 0.778
TCM_008193 Theobroma cacao TCM_008193 I 0.678
TCM_015780 Theobroma cacao TCM_015780 I 0.827
Thhalv10001986m.g Eutrema salsugineum Thhalv10001986m.g I 0.664
Thhalv10003223m.g Eutrema salsugineum Thhalv10003223m.g I 0.729
Thhalv10024919m.g Eutrema salsugineum Thhalv10024919m.g I 0.834
APRR2 Vitis vinifera VIT_02s0012g00570 I 0.822