Cla009302 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla009302 T283200_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KAN1
M00878_2.00
Arabidopsis thaliana
NNRTNBNN

NNVNAYNN
PBM
Franco-Zorrilla et al.(2014)
KAN1
0.835 0.936
KAN1
M02308_2.00
Arabidopsis thaliana
NDNDTAHNHN

NDNDTAHNHN
PBM
Weirauch et al.(2014)
pTH7135
0.835 0.936
KAN2
M07018_2.00
Arabidopsis thaliana
HHHNDWATATTCTYH

DRAGAATATWHNDDD
Dap-seq
OMalley et al.(2016)
KAN2_col_a
0.801 0.894
KAN2
M07019_2.00
Arabidopsis thaliana
NWWTATTCYYH

DRRGAATAWWN
Dap-seq
OMalley et al.(2016)
KAN2_colamp_a
0.801 0.894
KAN4
M00881_2.00
Arabidopsis thaliana
NWNRTBCNN

NNGVAYNWN
PBM
Franco-Zorrilla et al.(2014)
KAN4
0.795 0.872
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla009302 Myb 53 104

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

342 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AARA002368 Anopheles arabiensis AARA002368 N 0.000
AATE006830 Anopheles atroparvus AATE006830 N 0.000
ACHR006822 Anopheles christyi ACHR006822 N 0.000
ACOM039170 Anopheles coluzzii ACOM039170 N 0.000
ACYPI005784 Acyrthosiphon pisum ACYPI005784 N 0.000
ADIR008809 Anopheles dirus ADIR008809 N 0.000
AFAF016522 Anopheles farauti AFAF016522 N 0.000
AFUN003733 Anopheles funestus AFUN003733 N 0.000
AGAP005428 Anopheles gambiae AGAP005428 N 0.000
AMEC009803 Anopheles melas AMEC009803 N 0.000
AMEM015432 Anopheles merus AMEM015432 N 0.000
AMIN011376 Anopheles minimus AMIN011376 N 0.000
AQUA007653 Anopheles quadriannulatus AQUA007653 N 0.000
ASTEI02056 Anopheles stephensi ASTEI02056 N 0.000
DAPPUDRAFT_308814 Daphnia pulex DAPPUDRAFT_308814 N 0.000
GB51483 Apis mellifera GB51483 N 0.000
HMEL011925 Heliconius melpomene HMEL011925 N 0.000
KGM_12908 Danaus plexippus KGM_12908 N 0.000
L798_09149 Zootermopsis nevadensis L798_09149 N 0.000