Cla009418 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla009418 T283202_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK06182.1
M02349_2.00
Cannabis sativa
WTACCTACCN

NGGTAGGTAW
PBM
Weirauch et al.(2014)
pTH9581
0.766 0.817
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.764 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla009418 Myb 14 61
Cla009418 Myb 67 112

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28226.m000839 Ricinus communis 28226.m000839 I 0.670
30068.m002544 Ricinus communis 30068.m002544 I 0.683
AMTR_s00005p00268890 Amborella trichopoda AMTR_s00005p00268890 I 0.669
AMTR_s00030p00146410 Amborella trichopoda AMTR_s00030p00146410 I 0.665
Aquca_003_00583 Aquilegia coerulea Aquca_003_00583 I 0.802
Aquca_028_00141 Aquilegia coerulea Aquca_028_00141 I 0.694
ATMYB11 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002710 I 0.776
BGIOSGA003345 Oryza indica BGIOSGA003345 I 0.777
BGIOSGA010900 Oryza indica BGIOSGA010900 I 0.801
Bo2g009800 Brassica oleracea Bo2g009800 I 0.663
Bo3g039690 Brassica oleracea Bo3g039690 I 0.792
Bo3g044210 Brassica oleracea Bo3g044210 I 0.667
Bo4g004500 Brassica oleracea Bo4g004500 I 0.769
Bo7g092680 Brassica oleracea Bo7g092680 I 0.788
Bostr.13158s0261 Boechera stricta Bostr.13158s0261 I 0.772
Bostr.1460s0105 Boechera stricta Bostr.1460s0105 I 0.661
Bostr.15774s0064 Boechera stricta Bostr.15774s0064 I 0.748
Bostr.25993s0011 Boechera stricta Bostr.25993s0011 I 0.801
Bra000453 Brassica rapa Bra000453 I 0.784
Bra000680 Brassica rapa Bra000680 I 0.667
Bra006055 Brassica rapa Bra006055 I 0.671
Bra028593 Brassica rapa Bra028593 I 0.663
Bra036145 Brassica rapa Bra036145 I 0.779
Bra037419 Brassica rapa Bra037419 I 0.788
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.664
BRADI1G64687 Brachypodium distachyon BRADI1G64687 I 0.769
BRADI2G11676 Brachypodium distachyon BRADI2G11676 I 0.781
BRADI3G58770 Brachypodium distachyon BRADI3G58770 I 0.689
Cagra.0917s0061 Capsella grandiflora Cagra.0917s0061 I 0.667
Cagra.13170s0007 Capsella grandiflora Cagra.13170s0007 I 0.776
Cagra.6296s0007 Capsella grandiflora Cagra.6296s0007 I 0.788
Cagra.9781s0007 Capsella grandiflora Cagra.9781s0007 I 0.663
Carubv10012451m.g Capsella rubella Carubv10012451m.g I 0.663
Carubv10019345m.g Capsella rubella Carubv10019345m.g I 0.776
Carubv10024801m.g Capsella rubella Carubv10024801m.g I 0.757
Carubv10026694m.g Capsella rubella Carubv10026694m.g I 0.788
Carubv10026822m.g Capsella rubella Carubv10026822m.g I 0.667
cassava24756.valid.m1 Manihot esculenta cassava24756.valid.m1 I 0.787
cassava29110.valid.m1 Manihot esculenta cassava29110.valid.m1 I 0.708
cassava34176.m1 Manihot esculenta cassava34176.m1 I 0.666
cassava40469.m1 Manihot esculenta cassava40469.m1 I 0.787
Ca_03498 Cicer arietinum Ca_03498 I 0.750
chr2.CM0405.380.nd Lotus japonicus chr2.CM0405.380.nd I 0.678
chr5.CM0239.580.nc Lotus japonicus chr5.CM0239.580.nc I 0.788
Ciclev10005376m.g Citrus clementina Ciclev10005376m.g I 0.778
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.739
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.683
Ciclev10023756m.g Citrus clementina Ciclev10023756m.g I 0.675
Cla010483 Citrullus lanatus Cla010483 I 0.663
Cla017646 Citrullus lanatus Cla017646 I 0.747
Cla022107 Citrullus lanatus Cla022107 I 0.768
Cucsa.069500 Cucumis sativus Cucsa.069500 I 0.870
Cucsa.158170 Cucumis sativus Cucsa.158170 I 0.663
Cucsa.252700 Cucumis sativus Cucsa.252700 I 0.768
Eucgr.A00200 Eucalyptus grandis Eucgr.A00200 I 0.743
Eucgr.B02896 Eucalyptus grandis Eucgr.B02896 I 0.664
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.687
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.666
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.670
Eucgr.E01031 Eucalyptus grandis Eucgr.E01031 I 0.666
Eucgr.G02195 Eucalyptus grandis Eucgr.G02195 I 0.708
Eucgr.H01058 Eucalyptus grandis Eucgr.H01058 I 0.695
evm.TU.supercontig_18.11 Carica papaya evm.TU.supercontig_18.11 I 0.761
evm.TU.supercontig_9.95 Carica papaya evm.TU.supercontig_9.95 I 0.719
F775_11235 Aegilops tauschii F775_11235 I 0.785
F775_18434 Aegilops tauschii F775_18434 I 0.702
F775_21522 Aegilops tauschii F775_21522 I 0.707
F775_26732 Aegilops tauschii F775_26732 I 0.672
gene02324-v1.0-hybrid Fragaria vesca gene02324-v1.0-hybrid I 0.752
gene05167-v1.0-hybrid Fragaria vesca gene05167-v1.0-hybrid I 0.788
gene09406-v1.0-hybrid Fragaria vesca gene09406-v1.0-hybrid I 0.692
gene12738-v1.0-hybrid Fragaria vesca gene12738-v1.0-hybrid I 0.689
GLYMA02G01740 Glycine max GLYMA02G01740 I 0.778
GLYMA03G37640 Glycine max GLYMA03G37640 I 0.721
GLYMA07G37142 Glycine max GLYMA07G37142 I 0.768
GLYMA09G04370 Glycine max GLYMA09G04370 I 0.768
GLYMA10G01801 Glycine max GLYMA10G01801 I 0.758
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.700
GLYMA15G15400 Glycine max GLYMA15G15400 I 0.759
GLYMA17G03480 Glycine max GLYMA17G03480 I 0.774
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.700
GLYMA19G40250 Glycine max GLYMA19G40250 I 0.711
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.672
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I 0.774
Gorai.002G180300 Gossypium raimondii Gorai.002G180300 I 0.661
Gorai.003G097900 Gossypium raimondii Gorai.003G097900 I 0.665
Gorai.004G130900 Gossypium raimondii Gorai.004G130900 I 0.690
Gorai.005G162600 Gossypium raimondii Gorai.005G162600 I 0.669
Gorai.007G124000 Gossypium raimondii Gorai.007G124000 I 0.755
Gorai.008G141000 Gossypium raimondii Gorai.008G141000 I 0.817
Gorai.009G263200 Gossypium raimondii Gorai.009G263200 I 0.694
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.683
Gorai.011G195100 Gossypium raimondii Gorai.011G195100 I 0.756
Gorai.012G186500 Gossypium raimondii Gorai.012G186500 I 0.663
Gorai.013G088300 Gossypium raimondii Gorai.013G088300 I 0.663
GRMZM2G022686 Zea mays GRMZM2G022686 I 0.768
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.770
GRMZM2G051528 Zea mays GRMZM2G051528 I 0.768
GRMZM2G057027 Zea mays GRMZM2G057027 I 0.785
GRMZM2G084799 Zea mays GRMZM2G084799 I 0.785
GRMZM2G160838 Zea mays GRMZM2G160838 I 0.662
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.672
GSMUA_Achr10G24560_001 Musa acuminata GSMUA_Achr10G24560_001 I 0.676
GSMUA_Achr2G02970_001 Musa acuminata GSMUA_Achr2G02970_001 I 0.665
GSMUA_Achr2G20600_001 Musa acuminata GSMUA_Achr2G20600_001 I 0.661
GSMUA_Achr3G21000_001 Musa acuminata GSMUA_Achr3G21000_001 I 0.694
GSMUA_Achr5G21250_001 Musa acuminata GSMUA_Achr5G21250_001 I 0.790
GSMUA_Achr5G26000_001 Musa acuminata GSMUA_Achr5G26000_001 I 0.670
GSMUA_Achr8G10470_001 Musa acuminata GSMUA_Achr8G10470_001 I 0.787
GSMUA_AchrUn_randomG12700_001 Musa acuminata GSMUA_AchrUn_randomG12700_001 I 0.787
GSMUA_AchrUn_randomG28780_001 Musa acuminata GSMUA_AchrUn_randomG28780_001 I 0.661
HOS10 Arabidopsis lyrata fgenesh2_kg.1__3635__AT1G35515.1 I 0.667
LPERR03G12690 Leersia perrieri LPERR03G12690 I 0.794
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.688
Lus10001458.g Linum usitatissimum Lus10001458.g I 0.724
Lus10002435.g Linum usitatissimum Lus10002435.g I 0.750
Lus10010273.g Linum usitatissimum Lus10010273.g I 0.675
Lus10016855.g Linum usitatissimum Lus10016855.g I 0.712
Lus10027459.g Linum usitatissimum Lus10027459.g I 0.697
Lus10036336.g Linum usitatissimum Lus10036336.g I 0.721
Lus10039214.g Linum usitatissimum Lus10039214.g I 0.695
MDP0000119725 Malus domestica MDP0000119725 I 0.744
MDP0000140609 Malus domestica MDP0000140609 I 0.679
MDP0000209761 Malus domestica MDP0000209761 I 0.682
MDP0000607330 Malus domestica MDP0000607330 I 0.744
MDP0000868578 Malus domestica MDP0000868578 I 0.668
MDP0000887107 Malus domestica MDP0000887107 I 0.670
mgf003233m Mimulus guttatus mgf003233m I 0.772
mgf012733m Mimulus guttatus mgf012733m I 0.773
mgf024278m Mimulus guttatus mgf024278m I 0.757
MLOC_52134 Hordeum vulgare MLOC_52134 I 0.672
MLOC_57220 Hordeum vulgare MLOC_57220 I 0.785
MTR_2g034790 Medicago truncatula MTR_2g034790 I 0.761
MTR_4g121460 Medicago truncatula MTR_4g121460 I 0.774
MTR_7g109320 Medicago truncatula MTR_7g109320 I 0.721
MYB11 Arabidopsis thaliana AT3G62610 I 0.732
MYB111 Arabidopsis thaliana AT5G49330 D 0.764
MYB111 Arabidopsis lyrata scaffold_801313.1 I 0.764
MYB12 Arabidopsis lyrata fgenesh2_kg.4__2983__AT2G47460.1 I 0.805
MYB12 Arabidopsis thaliana AT2G47460 I 0.805
MYB8 Arabidopsis thaliana AT1G35515 I 0.662
OB01G22640 Oryza brachyantha OB01G22640 I 0.770
OB02G39890 Oryza brachyantha OB02G39890 I 0.666
OB03G24320 Oryza brachyantha OB03G24320 I 0.746
OB06G17320 Oryza brachyantha OB06G17320 I 0.664
OBART01G11800 Oryza barthii OBART01G11800 I 0.730
OBART02G32900 Oryza barthii OBART02G32900 I 0.666
OBART03G14380 Oryza barthii OBART03G14380 I 0.801
OBART06G07710 Oryza barthii OBART06G07710 I 0.668
OGLUM01G14390 Oryza glumaepatula OGLUM01G14390 I 0.777
OGLUM02G33500 Oryza glumaepatula OGLUM02G33500 I 0.666
OGLUM03G14490 Oryza glumaepatula OGLUM03G14490 I 0.753
OGLUM06G08200 Oryza glumaepatula OGLUM06G08200 I 0.668
OMERI02G31500 Oryza meridionalis OMERI02G31500 I 0.666
OMERI03G13130 Oryza meridionalis OMERI03G13130 I 0.801
OMERI06G09300 Oryza meridionalis OMERI06G09300 I 0.675
ONIVA01G15380 Oryza nivara ONIVA01G15380 I 0.730
ONIVA02G35050 Oryza nivara ONIVA02G35050 I 0.666
ONIVA03G15280 Oryza nivara ONIVA03G15280 I 0.801
ONIVA06G08940 Oryza nivara ONIVA06G08940 I 0.668
OPUNC02G30360 Oryza punctata OPUNC02G30360 I 0.666
OPUNC03G13890 Oryza punctata OPUNC03G13890 I 0.818
OPUNC06G07380 Oryza punctata OPUNC06G07380 I 0.675
orange1.1g014829m.g Citrus sinensis orange1.1g014829m.g I 0.739
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.683
orange1.1g041081m.g Citrus sinensis orange1.1g041081m.g I 0.778
orange1.1g046093m.g Citrus sinensis orange1.1g046093m.g I 0.675
ORGLA01G0099200 Oryza glaberrima ORGLA01G0099200 I 0.730
ORGLA02G0284500 Oryza glaberrima ORGLA02G0284500 I 0.666
ORGLA03G0138900 Oryza glaberrima ORGLA03G0138900 I 0.753
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.662
ORGLA06G0073000 Oryza glaberrima ORGLA06G0073000 I 0.668
ORUFI01G13920 Oryza rufipogon ORUFI01G13920 I 0.777
ORUFI02G34560 Oryza rufipogon ORUFI02G34560 I 0.666
ORUFI03G15030 Oryza rufipogon ORUFI03G15030 I 0.801
OS01G0305900 Oryza sativa OS01G0305900 I 0.777
OS06G0221000 Oryza sativa OS06G0221000 I 0.668
Pavir.Ib01420 Panicum virgatum Pavir.Ib01420 I 0.794
Pavir.J00442 Panicum virgatum Pavir.J00442 I 0.667
PDK_20s1310471g002 Phoenix dactylifera PDK_20s1310471g002 I 0.666
PDK_20s1388491g004 Phoenix dactylifera PDK_20s1388491g004 I 0.755
PGSC0003DMG400004371 Solanum tuberosum PGSC0003DMG400004371 I 0.757
PGSC0003DMG400007304 Solanum tuberosum PGSC0003DMG400007304 I 0.757
PGSC0003DMG400009033 Solanum tuberosum PGSC0003DMG400009033 I 0.769
PGSC0003DMG401023433 Solanum tuberosum PGSC0003DMG401023433 I 0.705
PK06182.1 Cannabis sativa PK06182.1 D 0.766
PK11717.1 Cannabis sativa PK11717.1 I 0.674
PK16315.1 Cannabis sativa PK16315.1 I 0.690
PK16958.1 Cannabis sativa PK16958.1 I 0.778
Pm008294 Prunus mume Pm008294 I 0.782
Pm019588 Prunus mume Pm019588 I 0.667
Pm020104 Prunus mume Pm020104 I 0.680
Pm025102 Prunus mume Pm025102 I 0.687
Pm029185 Prunus mume Pm029185 I 0.670
POPTR_0001s11100 Populus trichocarpa POPTR_0001s11100 I 0.666
POPTR_0002s19920 Populus trichocarpa POPTR_0002s19920 I 0.778
POPTR_0003s14420 Populus trichocarpa POPTR_0003s14420 I 0.666
POPTR_0003s14430 Populus trichocarpa POPTR_0003s14430 I 0.662
POPTR_0010s15090 Populus trichocarpa POPTR_0010s15090 I 0.771
POPTR_0014s11780 Populus trichocarpa POPTR_0014s11780 I 0.787
PRUPE_ppa004560mg Prunus persica PRUPE_ppa004560mg I 0.735
PRUPE_ppa007594mg Prunus persica PRUPE_ppa007594mg I 0.793
PRUPE_ppa010846mg Prunus persica PRUPE_ppa010846mg I 0.670
PRUPE_ppa011954mg Prunus persica PRUPE_ppa011954mg I 0.687
PRUPE_ppa017039mg Prunus persica PRUPE_ppa017039mg I 0.667
SapurV1A.0035s0030 Salix purpurea SapurV1A.0035s0030 I 0.666
SapurV1A.0050s0720 Salix purpurea SapurV1A.0050s0720 I 0.760
SapurV1A.0059s0150 Salix purpurea SapurV1A.0059s0150 I 0.666
SapurV1A.0059s0160 Salix purpurea SapurV1A.0059s0160 I 0.679
SapurV1A.0102s0340 Salix purpurea SapurV1A.0102s0340 I 0.671
SapurV1A.0120s0010 Salix purpurea SapurV1A.0120s0010 I 0.670
SapurV1A.0158s0390 Salix purpurea SapurV1A.0158s0390 I 0.749
SapurV1A.0180s0510 Salix purpurea SapurV1A.0180s0510 I 0.787
SapurV1A.0390s0200 Salix purpurea SapurV1A.0390s0200 I 0.671
SapurV1A.1730s0020 Salix purpurea SapurV1A.1730s0020 I 0.671
Sb01g037670 Sorghum bicolor Sb01g037670 I 0.783
Sb03g012550 Sorghum bicolor Sb03g012550 I 0.779
SELMODRAFT_120788 Selaginella moellendorffii SELMODRAFT_120788 I 0.679
SELMODRAFT_450007 Selaginella moellendorffii SELMODRAFT_450007 I 0.679
Si002107m.g Setaria italica Si002107m.g I 0.779
Si017785m.g Setaria italica Si017785m.g I 0.664
Si039538m.g Setaria italica Si039538m.g I 0.794
Solyc01g079620.2 Solanum lycopersicum Solyc01g079620.2 I 0.765
Solyc06g009710.2 Solanum lycopersicum Solyc06g009710.2 I 0.766
Solyc12g049350.1 Solanum lycopersicum Solyc12g049350.1 I 0.748
TCM_004777 Theobroma cacao TCM_004777 I 0.775
TCM_010839 Theobroma cacao TCM_010839 I 0.669
TCM_011659 Theobroma cacao TCM_011659 I 0.663
TCM_015685 Theobroma cacao TCM_015685 I 0.665
TCM_021317 Theobroma cacao TCM_021317 I 0.787
TCM_021318 Theobroma cacao TCM_021318 I 0.768
TCM_037377 Theobroma cacao TCM_037377 I 0.667
TCM_037555 Theobroma cacao TCM_037555 I 0.701
Thhalv10001498m.g Eutrema salsugineum Thhalv10001498m.g I 0.801
Thhalv10004518m.g Eutrema salsugineum Thhalv10004518m.g I 0.755
Thhalv10006080m.g Eutrema salsugineum Thhalv10006080m.g I 0.785
Traes_1DS_711044AD5 Triticum aestivum Traes_1DS_711044AD5 I 0.756
Traes_4AS_3883DC244 Triticum aestivum Traes_4AS_3883DC244 I 0.785
Traes_4DL_967152326 Triticum aestivum Traes_4DL_967152326 I 0.785
Traes_6AL_2BA02CAA9 Triticum aestivum Traes_6AL_2BA02CAA9 I 0.672
Traes_6AL_52227091B Triticum aestivum Traes_6AL_52227091B I 0.689
Traes_6BL_0D6CD031E Triticum aestivum Traes_6BL_0D6CD031E I 0.672
Traes_6BL_5A2DB8F78 Triticum aestivum Traes_6BL_5A2DB8F78 I 0.672
Traes_6DL_499F64524 Triticum aestivum Traes_6DL_499F64524 I 0.672
Traes_6DL_8BF29D46C Triticum aestivum Traes_6DL_8BF29D46C I 0.672
TRIUR3_03772 Triticum urartu TRIUR3_03772 I 0.672
TRIUR3_05136 Triticum urartu TRIUR3_05136 I 0.717
TRIUR3_23397 Triticum urartu TRIUR3_23397 I 0.689
TRIUR3_31689 Triticum urartu TRIUR3_31689 I 0.785
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.663
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.667
VIT_05s0077g01360 Vitis vinifera VIT_05s0077g01360 I 0.705
VIT_07s0005g01210 Vitis vinifera VIT_07s0005g01210 I 0.757
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.664
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.673
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.668
VIT_15s0046g00170 Vitis vinifera VIT_15s0046g00170 I 0.670
VIT_17s0000g02650 Vitis vinifera VIT_17s0000g02650 I 0.696
VIT_17s0000g06410 Vitis vinifera VIT_17s0000g06410 I 0.671