Cla018940 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla018940 T283300_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB52
M00871_2.00
Arabidopsis thaliana
NNNAMCNDNN

NNHNGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB52
0.810 0.903
MYB52
M07007_2.00
Arabidopsis thaliana
TAACGGTNHHD

HDDNACCGTTA
Dap-seq
OMalley et al.(2016)
MYB52_col_a
0.810 0.903
MYB105
M07031_2.00
Arabidopsis thaliana
TAACGGTWWHDDW

WHHDWWACCGTTA
Dap-seq
OMalley et al.(2016)
MYB105_col_a
0.761 0.828
MYB105
M07032_2.00
Arabidopsis thaliana
NNDWHDHTAACGGWWWH

DWWWCCGTTADHDWHNN
Dap-seq
OMalley et al.(2016)
MYB105_colamp_a
0.761 0.828
MYB56
M07130_2.00
Arabidopsis thaliana
DDHNHTAACKGWHWH

DWDWCMGTTADNDHH
Dap-seq
OMalley et al.(2016)
MYB56_col_a
0.719 0.753
MYB56
M07131_2.00
Arabidopsis thaliana
DNNHTAACGGWHWHD

HDWDWCCGTTADNNH
Dap-seq
OMalley et al.(2016)
MYB56_colamp_a
0.719 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018940 Myb 4 50
Cla018940 Myb 56 101

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

376 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OIDMADRAFT_106905 Oidiodendron maius OIDMADRAFT_106905 I 0.000
Bcin05g01950 Botrytis cinerea Bcin05g01950 I 0.000
PV08_07902 Exophiala spinifera PV08_07902 N 0.000
PV06_02513 Exophiala oligosperma PV06_02513 N 0.000
PFICI_13949 Pestalotiopsis fici PFICI_13949 N 0.000
PFICI_10838 Pestalotiopsis fici PFICI_10838 N 0.000
PEX1_002100 Penicillium expansum PEX1_002100 N 0.000
OIDMADRAFT_132235 Oidiodendron maius OIDMADRAFT_132235 N 0.000
OIDMADRAFT_125400 Oidiodendron maius OIDMADRAFT_125400 N 0.000
PV10_00327 Exophiala mesophila PV10_00327 N 0.000
SBOR_0565 Sclerotinia borealis SBOR_0565 N 0.000
SS1G_05808 Sclerotinia sclerotiorum SS1G_05808 N 0.000
THITE_2056521 Thielavia terrestris THITE_2056521 N 0.000
TRIATDRAFT_54121 Trichoderma atroviride TRIATDRAFT_54121 N 0.000
TRIATDRAFT_92430 Trichoderma atroviride TRIATDRAFT_92430 N 0.000
UCREL1_8439 Eutypa lata UCREL1_8439 N 0.000
UCRPA7_8494 Togninia minima UCRPA7_8494 N 0.000
UCRPA7_8834 Togninia minima UCRPA7_8834 N 0.000
Z518_06305 Rhinocladiella mackenziei Z518_06305 N 0.000
A1O9_05406 Exophiala aquamarina A1O9_05406 N 0.000
NechaG98980 Fusarium solani NechaG98980 N 0.000
MYCTH_44604 Myceliophthora thermophila MYCTH_44604 N 0.000
ACRE_059070 Acremonium chrysogenum ACRE_059070 N 0.000
AUEXF2481DRAFT_45076 Aureobasidium subglaciale AUEXF2481DRAFT_45076 N 0.000
BBA_07592 Beauveria bassiana BBA_07592 N 0.000
CFIO01_06749 Colletotrichum fioriniae CFIO01_06749 N 0.000
CH063_08532 Colletotrichum higginsianum CH063_08532 N 0.000
Cob_11580 Colletotrichum orbiculare Cob_11580 N 0.000
CPUR_02343 Claviceps purpurea CPUR_02343 N 0.000
CSUB01_09245 Colletotrichum sublineola CSUB01_09245 N 0.000
CTHT_0055390 Chaetomium thermophilum CTHT_0055390 N 0.000
F503_07317 Ophiostoma piceae uamh F503_07317 N 0.000
FFUJ_00463 Fusarium fujikuroi FFUJ_00463 N 0.000
FGRRES_00774 Fusarium graminearum FGRRES_00774 N 0.000
FOXG_01108 Fusarium oxysporum FOXG_01108 N 0.000
FPSE_09241 Fusarium pseudograminearum FPSE_09241 N 0.000
FVEG_00406 Fusarium verticillioides FVEG_00406 N 0.000
GGTG_03662 Gaeumannomyces graminis GGTG_03662 N 0.000
GLRG_00869 Colletotrichum graminicola GLRG_00869 N 0.000
estExt_fgenesh1_pg.C_sca_1_chr1_3_01001 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_01001 N 0.000