Cla021563 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla021563 T283325_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AtMYB17
M07099_2.00
Arabidopsis thaliana
YYYACCWACCWHHHH

DDDDWGGTWGGTRRR
Dap-seq
OMalley et al.(2016)
MYB17_colamp_a
0.740 0.849
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla021563 Myb 14 62
Cla021563 Myb 68 113

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.258270 Cucumis sativus Cucsa.258270 I 0.909
MTR_8g031360 Medicago truncatula MTR_8g031360 I 0.830
Ca_13779 Cicer arietinum Ca_13779 I 0.830
MTR_7g076740 Medicago truncatula MTR_7g076740 I 0.819
Ca_06226 Cicer arietinum Ca_06226 I 0.812
GLYMA18G46480 Glycine max GLYMA18G46480 I 0.804
GLYMA09G39721 Glycine max GLYMA09G39721 I 0.804
PRUPE_ppa007268mg Prunus persica PRUPE_ppa007268mg I 0.800
Pm018056 Prunus mume Pm018056 I 0.800
GLYMA03G01540 Glycine max GLYMA03G01540 I 0.791
Lus10030378.g Linum usitatissimum Lus10030378.g I 0.789
SapurV1A.0024s0060 Salix purpurea SapurV1A.0024s0060 I 0.789
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.785
PK05754.1 Cannabis sativa PK05754.1 I 0.783
GLYMA07G07960 Glycine max GLYMA07G07960 I 0.782
Lus10014784.g Linum usitatissimum Lus10014784.g I 0.780
Pavir.Da02398 Panicum virgatum Pavir.Da02398 I 0.778
Eucgr.D02271 Eucalyptus grandis Eucgr.D02271 I 0.778
AtMYB17 Populus trichocarpa POPTR_0014s07700 I 0.774
SapurV1A.0533s0230 Salix purpurea SapurV1A.0533s0230 I 0.770
Bra007588 Brassica rapa Bra007588 I 0.766
Thhalv10006126m.g Eutrema salsugineum Thhalv10006126m.g I 0.766
Bo8g095790 Brassica oleracea Bo8g095790 I 0.766
Bra003443 Brassica rapa Bra003443 I 0.766
TCM_005371 Theobroma cacao TCM_005371 I 0.765
Ciclev10021268m.g Citrus clementina Ciclev10021268m.g I 0.765
orange1.1g021486m.g Citrus sinensis orange1.1g021486m.g I 0.765
cassava25066.valid.m1 Manihot esculenta cassava25066.valid.m1 I 0.765
30174.m009001 Ricinus communis 30174.m009001 I 0.765
gene19065-v1.0-hybrid Fragaria vesca gene19065-v1.0-hybrid I 0.760
Aquca_013_00356 Aquilegia coerulea Aquca_013_00356 I 0.759
Gorai.001G169700 Gossypium raimondii Gorai.001G169700 I 0.758
Si006790m.g Setaria italica Si006790m.g I 0.756
BRADI1G51747 Brachypodium distachyon BRADI1G51747 I 0.756
PGSC0003DMG400021654 Solanum tuberosum PGSC0003DMG400021654 I 0.755
Solyc05g048830.2 Solanum lycopersicum Solyc05g048830.2 I 0.755
Gorai.004G157600 Gossypium raimondii Gorai.004G157600 I 0.755
PGSC0003DMG400000027 Solanum tuberosum PGSC0003DMG400000027 I 0.753
Bra014446 Brassica rapa Bra014446 I 0.751
Solyc01g094360.2 Solanum lycopersicum Solyc01g094360.2 I 0.750
mgf012840m Mimulus guttatus mgf012840m I 0.748
AtMYB17 Vitis vinifera VIT_15s0046g03190 I 0.747
Pavir.Ab02419 Panicum virgatum Pavir.Ab02419 I 0.740
Pavir.Aa01232 Panicum virgatum Pavir.Aa01232 I 0.740
AtMYB17 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002102 I 0.740
AtMYB17 Arabidopsis thaliana AT3G61250 D 0.740
Sb04g033670 Sorghum bicolor Sb04g033670 I 0.740
Si017934m.g Setaria italica Si017934m.g I 0.740
Eucgr.E00175 Eucalyptus grandis Eucgr.E00175 I 0.739
Cagra.3373s0030 Capsella grandiflora Cagra.3373s0030 I 0.728
Carubv10018382m.g Capsella rubella Carubv10018382m.g I 0.728
Bostr.13158s0117 Boechera stricta Bostr.13158s0117 I 0.728
Traes_7DS_91CCCF6DB1 Triticum aestivum Traes_7DS_91CCCF6DB1 I 0.726
Traes_4AL_9BF07972C Triticum aestivum Traes_4AL_9BF07972C I 0.726
Traes_4DL_4EE7DFCCD Triticum aestivum Traes_4DL_4EE7DFCCD I 0.726
Traes_7DS_91CCCF6DB Triticum aestivum Traes_7DS_91CCCF6DB I 0.726
Pavir.J23197 Panicum virgatum Pavir.J23197 I 0.726
F775_14942 Aegilops tauschii F775_14942 I 0.726
evm.TU.supercontig_107.48 Carica papaya evm.TU.supercontig_107.48 I 0.725
GSMUA_Achr11G04090_001 Musa acuminata GSMUA_Achr11G04090_001 I 0.724
GRMZM2G040924 Zea mays GRMZM2G040924 I 0.723
OS02G0641900 Oryza sativa OS02G0641900 I 0.723
GRMZM2G111045 Zea mays GRMZM2G111045 I 0.723
F775_04867 Aegilops tauschii F775_04867 I 0.723
OB02G32960 Oryza brachyantha OB02G32960 I 0.723
ORUFI02G27000 Oryza rufipogon ORUFI02G27000 I 0.723
BGIOSGA008700 Oryza indica BGIOSGA008700 I 0.723
TRIUR3_17294 Triticum urartu TRIUR3_17294 I 0.723
cassava40203.m1 Manihot esculenta cassava40203.m1 I 0.720
Bo6g077600 Brassica oleracea Bo6g077600 I 0.718
GRMZM2G102790 Zea mays GRMZM2G102790 I 0.714
POPTR_0015s13180 Populus trichocarpa POPTR_0015s13180 I 0.709
TCM_001102 Theobroma cacao TCM_001102 I 0.699
Gorai.007G236800 Gossypium raimondii Gorai.007G236800 I 0.699
GSMUA_Achr5G12230_001 Musa acuminata GSMUA_Achr5G12230_001 I 0.693
Gorai.013G114900 Gossypium raimondii Gorai.013G114900 I 0.693
estExt_gwp_gw1.C_20043 Physcomitrella patens estExt_gwp_gw1.C_20043 I 0.690
Carubv10003148m.g Capsella rubella Carubv10003148m.g I 0.689
Cagra.1085s0031 Capsella grandiflora Cagra.1085s0031 I 0.689
OPUNC03G18740 Oryza punctata OPUNC03G18740 I 0.688
e_gw1.326.5.1 Physcomitrella patens e_gw1.326.5.1 I 0.687
e_gw1.106.133.1 Physcomitrella patens e_gw1.106.133.1 I 0.687
GRMZM2G044824 Zea mays GRMZM2G044824 I 0.687
Gorai.008G179600 Gossypium raimondii Gorai.008G179600 I 0.687
GSMUA_Achr10G19130_001 Musa acuminata GSMUA_Achr10G19130_001 I 0.685
BRADI3G36660 Brachypodium distachyon BRADI3G36660 I 0.683
F775_52372 Aegilops tauschii F775_52372 I 0.683
MDP0000127521 Malus domestica MDP0000127521 I 0.682
orange1.1g045434m.g Citrus sinensis orange1.1g045434m.g I 0.682
Ciclev10026023m.g Citrus clementina Ciclev10026023m.g I 0.682
MLOC_39554 Hordeum vulgare MLOC_39554 I 0.680
Traes_2DL_5A0300CE0 Triticum aestivum Traes_2DL_5A0300CE0 I 0.678
Gorai.003G039500 Gossypium raimondii Gorai.003G039500 I 0.678
GSMUA_Achr6G04130_001 Musa acuminata GSMUA_Achr6G04130_001 I 0.678
MLOC_68698 Hordeum vulgare MLOC_68698 I 0.678
Traes_2BL_79F1B50DF Triticum aestivum Traes_2BL_79F1B50DF I 0.678
gene12564-v1.0-hybrid Fragaria vesca gene12564-v1.0-hybrid I 0.675
evm.TU.supercontig_90.68 Carica papaya evm.TU.supercontig_90.68 I 0.675
Pm004557 Prunus mume Pm004557 I 0.675
PRUPE_ppa026006mg Prunus persica PRUPE_ppa026006mg I 0.675
OB06G17320 Oryza brachyantha OB06G17320 I 0.674
MTR_7g011170 Medicago truncatula MTR_7g011170 I 0.674
BRADI1G45510 Brachypodium distachyon BRADI1G45510 I 0.674
Bo2g012520 Brassica oleracea Bo2g012520 I 0.674
Bra023515 Brassica rapa Bra023515 I 0.674
GSMUA_Achr10G24560_001 Musa acuminata GSMUA_Achr10G24560_001 I 0.673
e_gw1.317.17.1 Physcomitrella patens e_gw1.317.17.1 I 0.672
evm.TU.supercontig_752.1 Carica papaya evm.TU.supercontig_752.1 I 0.672
cassava26282.m1 Manihot esculenta cassava26282.m1 I 0.672
chr1.CM0591.530.nd Lotus japonicus chr1.CM0591.530.nd I 0.671
cassava17115.m1 Manihot esculenta cassava17115.m1 I 0.671
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.670
F775_06136 Aegilops tauschii F775_06136 I 0.670
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.670
Traes_7BS_7E91DE546 Triticum aestivum Traes_7BS_7E91DE546 I 0.670
ORGLA06G0073000 Oryza glaberrima ORGLA06G0073000 I 0.670
OS06G0221000 Oryza sativa OS06G0221000 I 0.670
OMERI06G09300 Oryza meridionalis OMERI06G09300 I 0.670
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.670
ONIVA06G08940 Oryza nivara ONIVA06G08940 I 0.670
OGLUM06G08200 Oryza glumaepatula OGLUM06G08200 I 0.670
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.670
OB08G25790 Oryza brachyantha OB08G25790 I 0.670
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.670
OBART06G07710 Oryza barthii OBART06G07710 I 0.670
Traes_7DS_469ED3135 Triticum aestivum Traes_7DS_469ED3135 I 0.670
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.670
MDP0000320772 Malus domestica MDP0000320772 I 0.669
gene16287-v1.0-hybrid Fragaria vesca gene16287-v1.0-hybrid I 0.669
chr2.CM0124.80.nc Lotus japonicus chr2.CM0124.80.nc I 0.669
VIT_07s0141g00100 Vitis vinifera VIT_07s0141g00100 I 0.669
Traes_6BL_5A2DB8F78 Triticum aestivum Traes_6BL_5A2DB8F78 I 0.669
MTR_4g082290 Medicago truncatula MTR_4g082290 I 0.669
Traes_2AL_5EE86C5BC Triticum aestivum Traes_2AL_5EE86C5BC I 0.669
PRUPE_ppa019923mg Prunus persica PRUPE_ppa019923mg I 0.669
Traes_6DL_499F64524 Triticum aestivum Traes_6DL_499F64524 I 0.669
F775_26732 Aegilops tauschii F775_26732 I 0.669
Pm002011 Prunus mume Pm002011 I 0.669
GSMUA_Achr9G14850_001 Musa acuminata GSMUA_Achr9G14850_001 I 0.669
Ca_27606 Cicer arietinum Ca_27606 I 0.669
OB04G26860 Oryza brachyantha OB04G26860 I 0.668
ORUFI04G21320 Oryza rufipogon ORUFI04G21320 I 0.668
ORGLA04G0169000 Oryza glaberrima ORGLA04G0169000 I 0.668
BRADI3G38807 Brachypodium distachyon BRADI3G38807 I 0.668
BGIOSGA016822 Oryza indica BGIOSGA016822 I 0.668
ONIVA04G17990 Oryza nivara ONIVA04G17990 I 0.668
ONIVA06G00830 Oryza nivara ONIVA06G00830 I 0.667
OS06G0112700 Oryza sativa OS06G0112700 I 0.667
ORUFI06G00810 Oryza rufipogon ORUFI06G00810 I 0.667
BGIOSGA022174 Oryza indica BGIOSGA022174 I 0.667
OPUNC06G00590 Oryza punctata OPUNC06G00590 I 0.667
OBART06G00820 Oryza barthii OBART06G00820 I 0.667
BGIOSGA022168 Oryza indica BGIOSGA022168 I 0.667
BGIOSGA022169 Oryza indica BGIOSGA022169 I 0.667
OMERI06G00710 Oryza meridionalis OMERI06G00710 I 0.667
OGLUM06G00580 Oryza glumaepatula OGLUM06G00580 I 0.667
GLYMA07G35561 Glycine max GLYMA07G35561 I 0.666
GLYMA20G04240 Glycine max GLYMA20G04240 I 0.666
MDP0000302984 Malus domestica MDP0000302984 I 0.665
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.665
SapurV1A.2488s0010 Salix purpurea SapurV1A.2488s0010 I 0.665
SapurV1A.0403s0220 Salix purpurea SapurV1A.0403s0220 I 0.665
MDP0000228252 Malus domestica MDP0000228252 I 0.665
Lus10041142.g Linum usitatissimum Lus10041142.g I 0.665
Gorai.009G281000 Gossypium raimondii Gorai.009G281000 I 0.665
Lus10036472.g Linum usitatissimum Lus10036472.g I 0.665
TCM_034902 Theobroma cacao TCM_034902 I 0.665
evm.TU.supercontig_36.134 Carica papaya evm.TU.supercontig_36.134 I 0.665
POPTR_0005s07590 Populus trichocarpa POPTR_0005s07590 I 0.665
LPERR04G19330 Leersia perrieri LPERR04G19330 I 0.664
Eucgr.I00442 Eucalyptus grandis Eucgr.I00442 I 0.664
Traes_2DL_25FD0FFB4 Triticum aestivum Traes_2DL_25FD0FFB4 I 0.664
Traes_2DL_6BD0572DF Triticum aestivum Traes_2DL_6BD0572DF I 0.664
Ciclev10020765m.g Citrus clementina Ciclev10020765m.g I 0.663
Aquca_005_00496 Aquilegia coerulea Aquca_005_00496 I 0.663
mgf016794m Mimulus guttatus mgf016794m I 0.663
AMTR_s00010p00267100 Amborella trichopoda AMTR_s00010p00267100 I 0.663
orange1.1g039198m.g Citrus sinensis orange1.1g039198m.g I 0.663
chr3.CM0127.290.nc Lotus japonicus chr3.CM0127.290.nc I 0.663
MTR_4g082230 Medicago truncatula MTR_4g082230 I 0.662
Sb06g023620 Sorghum bicolor Sb06g023620 I 0.662
GRMZM2G081557 Zea mays GRMZM2G081557 N 0.662
BRADI3G49987 Brachypodium distachyon BRADI3G49987 I 0.662
Pavir.Db01850 Panicum virgatum Pavir.Db01850 I 0.661
Si008086m.g Setaria italica Si008086m.g I 0.661
POPTR_0012s13240 Populus trichocarpa POPTR_0012s13240 I 0.661
Pavir.Da01312 Panicum virgatum Pavir.Da01312 I 0.661
Traes_2AL_41B71F83C Triticum aestivum Traes_2AL_41B71F83C I 0.661
BGIOSGA010612 Oryza indica BGIOSGA010612 I 0.661
SapurV1A.1253s0080 Salix purpurea SapurV1A.1253s0080 I 0.661