Cla023001 (Citrullus lanatus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cla023001 T283339_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla023001 Myb 3 28
Cla023001 Myb 34 79

Links

Other Myb/SANT family TFs
Other Citrullus lanatus TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.865
Cucsa.089670 Cucumis sativus Cucsa.089670 N 0.861
Pm005451 Prunus mume Pm005451 N 0.852
PDK_20s1675721g001 Phoenix dactylifera PDK_20s1675721g001 N 0.847
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.800
mgf024109m Mimulus guttatus mgf024109m N 0.799
Pavir.Ga02684 Panicum virgatum Pavir.Ga02684 I 0.792
Eucgr.J00892 Eucalyptus grandis Eucgr.J00892 N 0.786
LjSGA_067208.1 Lotus japonicus LjSGA_067208.1 N 0.773
Traes_5AL_D1807A4E0 Triticum aestivum Traes_5AL_D1807A4E0 N 0.729
orange1.1g038824m.g Citrus sinensis orange1.1g038824m.g N 0.726
MDP0000244980 Malus domestica MDP0000244980 N 0.717
MDP0000470422 Malus domestica MDP0000470422 N 0.712
ONIVA07G19920 Oryza nivara ONIVA07G19920 N 0.697
Ciclev10020307m.g Citrus clementina Ciclev10020307m.g I 0.690
GLYMA18G32370 Glycine max GLYMA18G32370 N 0.688
GLYMA08G44950 Glycine max GLYMA08G44950 N 0.684
Pavir.J36591 Panicum virgatum Pavir.J36591 I 0.680
Pavir.Ca00655 Panicum virgatum Pavir.Ca00655 I 0.680
GRMZM2G305856 Zea mays GRMZM2G305856 I 0.680
mgf026463m Mimulus guttatus mgf026463m N 0.679
GLYMA08G03525 Glycine max GLYMA08G03525 N 0.671
LjSGA_032074.1 Lotus japonicus LjSGA_032074.1 N 0.670
MLOC_67874 Hordeum vulgare MLOC_67874 N 0.665
PDK_20s1376841g001 Phoenix dactylifera PDK_20s1376841g001 N 0.664
evm.TU.supercontig_87.85 Carica papaya evm.TU.supercontig_87.85 N 0.664
MYB21 Arabidopsis thaliana AT3G27810 I 0.663
MTR_7g111290 Medicago truncatula MTR_7g111290 I 0.663
Pavir.Ia02093 Panicum virgatum Pavir.Ia02093 N 0.661