CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla023001
(
Citrullus lanatus
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Cla023001
T283339_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla023001
Myb
3
28
LVATGLLCLKKLRCGKSCRLRWLNYL
Cla023001
Myb
34
79
HGGFSEEEDRIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Citrullus lanatus
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0004s0360
Salix purpurea
SapurV1A.0004s0360
I
0.865
Cucsa.089670
Cucumis sativus
Cucsa.089670
N
0.861
Pm005451
Prunus mume
Pm005451
N
0.852
PDK_20s1675721g001
Phoenix dactylifera
PDK_20s1675721g001
N
0.847
GLYMA14G10483
Glycine max
GLYMA14G10483
I
0.800
mgf024109m
Mimulus guttatus
mgf024109m
N
0.799
Pavir.Ga02684
Panicum virgatum
Pavir.Ga02684
I
0.792
Eucgr.J00892
Eucalyptus grandis
Eucgr.J00892
N
0.786
LjSGA_067208.1
Lotus japonicus
LjSGA_067208.1
N
0.773
Traes_5AL_D1807A4E0
Triticum aestivum
Traes_5AL_D1807A4E0
N
0.729
orange1.1g038824m.g
Citrus sinensis
orange1.1g038824m.g
N
0.726
MDP0000244980
Malus domestica
MDP0000244980
N
0.717
MDP0000470422
Malus domestica
MDP0000470422
N
0.712
ONIVA07G19920
Oryza nivara
ONIVA07G19920
N
0.697
Ciclev10020307m.g
Citrus clementina
Ciclev10020307m.g
I
0.690
GLYMA18G32370
Glycine max
GLYMA18G32370
N
0.688
GLYMA08G44950
Glycine max
GLYMA08G44950
N
0.684
Pavir.J36591
Panicum virgatum
Pavir.J36591
I
0.680
Pavir.Ca00655
Panicum virgatum
Pavir.Ca00655
I
0.680
GRMZM2G305856
Zea mays
GRMZM2G305856
I
0.680
mgf026463m
Mimulus guttatus
mgf026463m
N
0.679
GLYMA08G03525
Glycine max
GLYMA08G03525
N
0.671
LjSGA_032074.1
Lotus japonicus
LjSGA_032074.1
N
0.670
MLOC_67874
Hordeum vulgare
MLOC_67874
N
0.665
PDK_20s1376841g001
Phoenix dactylifera
PDK_20s1376841g001
N
0.664
evm.TU.supercontig_87.85
Carica papaya
evm.TU.supercontig_87.85
N
0.664
MYB21
Arabidopsis thaliana
AT3G27810
I
0.663
MTR_7g111290
Medicago truncatula
MTR_7g111290
I
0.663
Pavir.Ia02093
Panicum virgatum
Pavir.Ia02093
N
0.661