Gfo_R009151 (Geospiza fortis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gfo_R009151 T283394_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZZZ3
M01272_2.00
Homo sapiens
NSAATCCAWNN

NNWTGGATTSN
PBM
Lambert et al.(2019)
pTH11249
0.909 0.979
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R009151 Myb 668 719

Links

Other Myb/SANT family TFs
Other Geospiza fortis TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCEY_00556 Ancylostoma ceylanicum ANCCEY_00556 N 0.000
ACOC_0000250201 Angiostrongylus costaricensis ACOC_0000250201 N 0.000
BTMF_0000180701 Brugia timori BTMF_0000180701 N 0.000
BXY_0902500 Bursaphelenchus xylophilus BXY_0902500 N 0.000
DICVIV_04780 Dictyocaulus viviparus DICVIV_04780 N 0.000
nDi.2.2.2.g08137 Dirofilaria immitis nDi.2.2.2.g08137 N 0.000
DME_0000790101 Dracunculus medinensis DME_0000790101 N 0.000
EEL_0001004901 Elaeophora elaphi EEL_0001004901 N 0.000
HCOI00981900 Haemonchus contortus HCOI00981900 N 0.000
HPLM_0000734701 Haemonchus placei HPLM_0000734701 N 0.000
maker-nMf.1.1.scaf03581-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf03581-augustus-gene-0.6 N 0.000
maker-nMf.1.1.scaf01421-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf01421-snap-gene-0.8 N 0.000
Minc16567 Meloidogyne incognita Minc16567 N 0.000
OESDEN_12940 Oesophagostomum dentatum OESDEN_12940 N 0.000
OESDEN_11610 Oesophagostomum dentatum OESDEN_11610 N 0.000
OFLC_0000545801 Onchocerca flexuosa OFLC_0000545801 N 0.000
OFLC_0001390101 Onchocerca flexuosa OFLC_0001390101 N 0.000
WBGene00244828 Onchocerca volvulus WBGene00244828 N 0.000
PTRK_0001373600 Parastrongyloides trichosuri PTRK_0001373600 N 0.000
nRc.2.0.1.g14648 Romanomermis culicivorax nRc.2.0.1.g14648 N 0.000
L596_g6742 Steinernema carpocapsae L596_g6742 N 0.000
L889_g33285 Steinernema feltiae L889_g33285 N 0.000
L893_g10062 Steinernema glaseri L893_g10062 N 0.000
L898_g19329 Steinernema monticolum L898_g19329 N 0.000
SMUV_0000679801 Syphacia muris SMUV_0000679801 N 0.000
TCLT_0000846601 Thelazia callipaeda TCLT_0000846601 N 0.000
WUBG_06180 Wuchereria bancrofti WUBG_06180 N 0.000
WUBG_03674 Wuchereria bancrofti WUBG_03674 N 0.000