Pm006678 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm006678 T283491_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WER
M11047_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01 		0.683 0.806
WER
M11048_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WEREWOLF_Q2 		0.683 0.806
MYB23
M07133_2.00 		Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD		 Dap-seq
OMalley et al.(2016)
MYB23_col_a 		0.666 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm006678 Myb 9 56
Pm006678 Myb 62 107

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa014884mg Prunus persica PRUPE_ppa014884mg I 0.898
MDP0000164048 Malus domestica MDP0000164048 I 0.823
MDP0000537324 Malus domestica MDP0000537324 I 0.786
Aquca_002_00170 Aquilegia coerulea Aquca_002_00170 I 0.767
VIT_01s0127g00730 Vitis vinifera VIT_01s0127g00730 I 0.758
TCM_012057 Theobroma cacao TCM_012057 I 0.756
Aquca_025_00333 Aquilegia coerulea Aquca_025_00333 I 0.747
Ciclev10032713m.g Citrus clementina Ciclev10032713m.g I 0.745
Eucgr.B00373 Eucalyptus grandis Eucgr.B00373 I 0.741
Pm024725 Prunus mume Pm024725 I 0.740
Eucgr.B03324 Eucalyptus grandis Eucgr.B03324 N 0.740
TCM_016886 Theobroma cacao TCM_016886 I 0.717
MDP0000650225 Malus domestica MDP0000650225 I 0.716
VIT_17s0000g08480 Vitis vinifera VIT_17s0000g08480 I 0.712
cassava26193.m1 Manihot esculenta cassava26193.m1 I 0.711
SapurV1A.1404s0020 Salix purpurea SapurV1A.1404s0020 I 0.707
POPTR_0012s08190 Populus trichocarpa POPTR_0012s08190 I 0.703
Gorai.012G061800 Gossypium raimondii Gorai.012G061800 I 0.701
cassava27350.m1 Manihot esculenta cassava27350.m1 I 0.701
MDP0000578193 Malus domestica MDP0000578193 I 0.699
SapurV1A.1178s0050 Salix purpurea SapurV1A.1178s0050 I 0.698
orange1.1g047269m.g Citrus sinensis orange1.1g047269m.g I 0.697
evm.TU.supercontig_124.57 Carica papaya evm.TU.supercontig_124.57 I 0.696
MDP0000199965 Malus domestica MDP0000199965 I 0.695
Thhalv10005428m.g Eutrema salsugineum Thhalv10005428m.g I 0.694
Bostr.0556s0467 Boechera stricta Bostr.0556s0467 I 0.693
PRUPE_ppa010908mg Prunus persica PRUPE_ppa010908mg I 0.693
VIT_14s0066g01220 Vitis vinifera VIT_14s0066g01220 I 0.691
Gorai.007G001800 Gossypium raimondii Gorai.007G001800 I 0.685
Cagra.3166s0078 Capsella grandiflora Cagra.3166s0078 I 0.683
WER Arabidopsis thaliana AT5G14750 D 0.683
Carubv10001990m.g Capsella rubella Carubv10001990m.g I 0.683
Bo2g012170 Brassica oleracea Bo2g012170 I 0.683
Bostr.2902s0211 Boechera stricta Bostr.2902s0211 I 0.683
Thhalv10014715m.g Eutrema salsugineum Thhalv10014715m.g I 0.683
WER Arabidopsis lyrata fgenesh2_kg.6__1454__AT5G14750.1 I 0.683
LjT16O05.150.nd Lotus japonicus LjT16O05.150.nd I 0.679
Bra025311 Brassica rapa Bra025311 I 0.678
Eucgr.J02212 Eucalyptus grandis Eucgr.J02212 I 0.673
GSMUA_Achr3G21000_001 Musa acuminata GSMUA_Achr3G21000_001 I 0.670
TCM_010360 Theobroma cacao TCM_010360 I 0.670
GL1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5000559 I 0.668
GL1 Arabidopsis thaliana AT3G27920 I 0.668
Cagra.4961s0006 Capsella grandiflora Cagra.4961s0006 I 0.668
Carubv10018791m.g Capsella rubella Carubv10018791m.g I 0.668
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.667
Bo7g090950 Brassica oleracea Bo7g090950 I 0.667
POPTR_0015s08680 Populus trichocarpa POPTR_0015s08680 I 0.667
Thhalv10028340m.g Eutrema salsugineum Thhalv10028340m.g I 0.666
Bra008740 Brassica rapa Bra008740 I 0.666
Bra025589 Brassica rapa Bra025589 I 0.666
Bo9g165670 Brassica oleracea Bo9g165670 I 0.666
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.666
MYB23 Arabidopsis thaliana AT5G40330 D 0.666
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.666
Pm027048 Prunus mume Pm027048 I 0.666
Bostr.7200s0005 Boechera stricta Bostr.7200s0005 I 0.666
Cagra.3160s0003 Capsella grandiflora Cagra.3160s0003 I 0.666
Carubv10005698m.g Capsella rubella Carubv10005698m.g I 0.666
Ciclev10017556m.g Citrus clementina Ciclev10017556m.g I 0.665
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.664
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.661
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.661
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.661