Pm009050 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm009050 T283499_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH

DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.757 0.806
MYB62
M07027_2.00
Arabidopsis thaliana
NHRCCTAAYTWNHNN

NNDNWARTTAGGYDN
Dap-seq
OMalley et al.(2016)
MYB62_col_a
0.697 0.710
MYB62
M07028_2.00
Arabidopsis thaliana
HNKRCCTAACTHH

DDAGTTAGGYMND
Dap-seq
OMalley et al.(2016)
MYB62_colamp_a
0.697 0.710
MYB108
M07065_2.00
Arabidopsis thaliana
RCCWAAYYNNNNHNH

DNDNNNNRRTTWGGY
Dap-seq
OMalley et al.(2016)
BOS1_col_a
0.696 0.710
MYB116
M07014_2.00
Arabidopsis thaliana
NRCCTAAYTWNWNNN

NNNWNWARTTAGGYN
Dap-seq
OMalley et al.(2016)
MYB116_col_a
0.678 0.677
MYB116
M07015_2.00
Arabidopsis thaliana
HNTRCCTAACTHH

DDAGTTAGGYAND
Dap-seq
OMalley et al.(2016)
MYB116_colamp_a
0.678 0.677
MYB59
M00883_2.00
Arabidopsis thaliana
NKACCTAAYN

NRTTAGGTMN
PBM
Franco-Zorrilla et al.(2014)
MYB59
0.673 0.710
MYB27
M07097_2.00
Arabidopsis thaliana
HHTACCTAAYTTWWN

NWWAARTTAGGTADD
Dap-seq
OMalley et al.(2016)
MYB27_col_a
0.666 0.656
MYB27
M07098_2.00
Arabidopsis thaliana
NYHTACCTAAYTTWHN

NDWAARTTAGGTADRN
Dap-seq
OMalley et al.(2016)
MYB27_colamp_a
0.666 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm009050 Myb 23 70
Pm009050 Myb 76 121

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

602 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
AALB003340 Anopheles albimanus AALB003340 I 0.000
AARA009757 Anopheles arabiensis AARA009757 I 0.000
ACHR007729 Anopheles christyi ACHR007729 I 0.000
ACUA003826 Anopheles culicifacies ACUA003826 I 0.000
ADIR006616 Anopheles dirus ADIR006616 I 0.000
AEPI001687 Anopheles epiroticus AEPI001687 I 0.000
AMAM006295 Anopheles maculatus AMAM006295 I 0.000
AMIN002618 Anopheles minimus AMIN002618 I 0.000
ASTEI07078 Anopheles stephensi ASTEI07078 I 0.000
BGIBMGA005084 Bombyx mori BGIBMGA005084 I 0.000
Bm5024 Brugia malayi Bm5024 I 0.000
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I 0.000
CpipJ_CPIJ004052 Culex pipiens CpipJ_CPIJ004052 I 0.000
CPIJ004052 Culex quinquefasciatus CPIJ004052 I 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
YQE_10516 Dendroctonus ponderosae YQE_10516 I 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
GL11998 Drosophila persimilis FBgn0149606 I 0.000
EEL_0000266401 Elaeophora elaphi EEL_0000266401 I 0.000
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I 0.000
HCOI02128500 Haemonchus contortus HCOI02128500 I 0.000
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I 0.000
LOAG_14553 Loa loa LOAG_14553 I 0.000
LCUP011134 Lucilia cuprina LCUP011134 I 0.000
ENSMEUG00000002316 Macropus eugenii ENSMEUG00000002316 I 0.000
MCOS_0000195601 Mesocestoides corti MCOS_0000195601 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I 0.000
T265_07444 Opisthorchis viverrini T265_07444 N 0.000
PPAI010076 Phlebotomus papatasi PPAI010076 I 0.000
PXEA_0002638601 Protopolystoma xenopodis PXEA_0002638601 I 0.000
A_05794 Schistosoma haematobium A_05794 I 0.000
SMRZ_0000596101 Schistosoma margrebowiei SMRZ_0000596101 I 0.000
SMTD_0001301801 Schistosoma mattheei SMTD_0001301801 I 0.000
SBAD_0000068201 Soboliphyme baturini SBAD_0000068201 I 0.000
SINV18378 Solenopsis invicta SINV18378 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I 0.000
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I 0.000
D917_07791 Trichinella nativa D917_07791 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
WUBG_06449 Wuchereria bancrofti WUBG_06449 I 0.000