CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm015303
(
Prunus mume
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pm015303
T283541_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATMYB13
M06999_2.00
Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD
Dap-seq
OMalley et al.(2016)
MYB13_col_a
0.667
0.699
ATMYB13
M07000_2.00
Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV
Dap-seq
OMalley et al.(2016)
MYB13_colamp_a
0.667
0.699
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm015303
Myb
14
61
KGAWSPEEDDTLRVYIEEHGHVNWRSLPKFAGISRCGKSCRLRWTNYL
Pm015303
Myb
67
112
RGNYTQQEDDLILKLHQEFGNKWSMIAAKLPGRTDNEIKNHWNTRF
Links
Other
Myb/SANT
family TFs
Other
Prunus mume
TFs
212 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy