Pm018007 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm018007 T283561_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.696 0.763
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.696 0.763
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.694 0.763
Q948S4_TOBAC
M11073_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBB_01 		0.683 0.755
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm018007 Myb 51 97
Pm018007 Myb 103 149
Pm018007 Myb 155 199

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa022218mg Prunus persica PRUPE_ppa022218mg I 0.870
cassava40167.m1 Manihot esculenta cassava40167.m1 I 0.780
gene19115-v1.0-hybrid Fragaria vesca gene19115-v1.0-hybrid I 0.772
TCM_005402 Theobroma cacao TCM_005402 I 0.733
ATMYB3R2 Vitis vinifera VIT_15s0048g02120 N 0.726
ATMYB3R2 Populus trichocarpa POPTR_0014s07520 N 0.723
SapurV1A.0533s0050 Salix purpurea SapurV1A.0533s0050 N 0.722
SapurV1A.0586s0030 Salix purpurea SapurV1A.0586s0030 N 0.722
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.721
evm.TU.supercontig_18.208 Carica papaya evm.TU.supercontig_18.208 N 0.719
PDK_20s1371143g001 Phoenix dactylifera PDK_20s1371143g001 I 0.708
Gorai.008G117400 Gossypium raimondii Gorai.008G117400 N 0.704
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.702
TCM_047091 Theobroma cacao TCM_047091 I 0.697
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.697
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.697
Bo7g115810 Brassica oleracea Bo7g115810 I 0.696
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.696
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.696
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.696
29794.m003447 Ricinus communis 29794.m003447 I 0.694
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.694
Traes_3AS_09025DA2E Triticum aestivum Traes_3AS_09025DA2E I 0.692
TRAES3BF049800070CFD_g Triticum aestivum TRAES3BF049800070CFD_g I 0.692
Bra034531 Brassica rapa Bra034531 I 0.691
Bo3g171130 Brassica oleracea Bo3g171130 I 0.691
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.684
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I 0.684
OPUNC01G08000 Oryza punctata OPUNC01G08000 I 0.683
Q948S4_TOBAC Nicotiana tabacum Q948S4_TOBAC D 0.683
OPUNC01G07980 Oryza punctata OPUNC01G07980 I 0.683
F775_05724 Aegilops tauschii F775_05724 I 0.683
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I 0.681
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I 0.681
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I 0.681
Cla022565 Citrullus lanatus Cla022565 I 0.679
OBART01G08110 Oryza barthii OBART01G08110 I 0.679
OB12G16480 Oryza brachyantha OB12G16480 I 0.679
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I 0.679
MDP0000295807 Malus domestica MDP0000295807 I 0.679
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I 0.679
MTR_3g110028 Medicago truncatula MTR_3g110028 I 0.679
Cucsa.161430 Cucumis sativus Cucsa.161430 I 0.679
OLONG_011886 Oryza longistaminata OLONG_011886 I 0.679
OS12G0238000 Oryza sativa OS12G0238000 I 0.679
ORGLA12G0066300 Oryza glaberrima ORGLA12G0066300 I 0.679
OGLUM01G09290 Oryza glumaepatula OGLUM01G09290 I 0.679
ONIVA01G10670 Oryza nivara ONIVA01G10670 I 0.679
Ca_14925 Cicer arietinum Ca_14925 I 0.678
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I 0.676
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I 0.675
TRIUR3_24658 Triticum urartu TRIUR3_24658 I 0.674
Pavir.Eb00149 Panicum virgatum Pavir.Eb00149 I 0.673
Pavir.Ea00087 Panicum virgatum Pavir.Ea00087 I 0.673
Bra037045 Brassica rapa Bra037045 I 0.673
MTR_1g026870 Medicago truncatula MTR_1g026870 I 0.673
Traes_1BS_403DBC53C Triticum aestivum Traes_1BS_403DBC53C I 0.672
Cla023357 Citrullus lanatus Cla023357 I 0.672
Bra011376 Brassica rapa Bra011376 I 0.672
MDP0000179225 Malus domestica MDP0000179225 I 0.672
e_gw1.36.4.1 Physcomitrella patens e_gw1.36.4.1 I 0.672
Cucsa.311420 Cucumis sativus Cucsa.311420 I 0.672
Bo1g010040 Brassica oleracea Bo1g010040 I 0.672
GLYMA06G08660 Glycine max GLYMA06G08660 I 0.671
GLYMA04G08550 Glycine max GLYMA04G08550 I 0.671
Cagra.4093s0003 Capsella grandiflora Cagra.4093s0003 I 0.670
Thhalv10024320m.g Eutrema salsugineum Thhalv10024320m.g I 0.670
Carubv10004063m.g Capsella rubella Carubv10004063m.g I 0.670
ORGLA01G0073200 Oryza glaberrima ORGLA01G0073200 I 0.670
ORGLA01G0306500 Oryza glaberrima ORGLA01G0306500 I 0.669
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I 0.669
OGLUM01G40780 Oryza glumaepatula OGLUM01G40780 I 0.669
MYB3R-2 Oryza sativa OS01G0841500 I 0.669
OB01G18340 Oryza brachyantha OB01G18340 I 0.668
GSMUA_Achr2G19890_001 Musa acuminata GSMUA_Achr2G19890_001 I 0.668
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I 0.666
GSMUA_Achr2G03880_001 Musa acuminata GSMUA_Achr2G03880_001 N 0.666
e_gw1.120.1.1 Physcomitrella patens e_gw1.120.1.1 I 0.666
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I 0.664
AMTR_s00009p00263240 Amborella trichopoda AMTR_s00009p00263240 I 0.664
PK22174.1 Cannabis sativa PK22174.1 I 0.663