Pm029185 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm029185 T283647_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.791 0.796
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.778 0.785
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.778 0.785
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.704 0.753
MYB55
M00876_2.00
Arabidopsis thaliana
ACCWAMCD

HGKTWGGT
PBM
Franco-Zorrilla et al.(2014)
MYB55
0.683 0.699
MYB55
M07102_2.00
Arabidopsis thaliana
HNNNHBYAMCWAMCD

HGKTWGKTRVDNNND
Dap-seq
OMalley et al.(2016)
MYB55_colamp_a
0.683 0.699
MYB55
M07103_2.00
Arabidopsis thaliana
NYNYAMCHACCRHH

DDYGGTDGKTRNRN
Dap-seq
OMalley et al.(2016)
MYB55_col
0.683 0.699
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.672 0.731
MYB83
M01073_2.00
Arabidopsis thaliana
YACCHACC

GGTDGGTR
PBM
Sullivan et al.(2014)
pTH7140
0.661 0.677
MYB83
M07066_2.00
Arabidopsis thaliana
YCACCAACHNH

DNDGTTGGTGR
Dap-seq
OMalley et al.(2016)
MYB83_col_a
0.661 0.677
MYB83
M07067_2.00
Arabidopsis thaliana
NCACCWAMCDNHNNN

NNNDNHGKTWGGTGN
Dap-seq
OMalley et al.(2016)
MYB83_colamp_a
0.661 0.677
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm029185 Myb 13 60
Pm029185 Myb 66 111

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

793 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Trp53 Mus musculus ENSMUSG00000059552 D 0.000
TP53 Homo sapiens ENSG00000141510 D 0.000
ENSPPYG00000007934 Pongo abelii ENSPPYG00000007934 I 0.000
TP53 Procavia capensis ENSPCAG00000012725 I 0.000
ENSPANG00000024061 Papio anubis ENSPANG00000024061 I 0.000
TP53 Ochotona princeps ENSOPRG00000006441 I 0.000
TP53 Otolemur garnettii ENSOGAG00000016871 I 0.000
ENSOCUG00000022109 Oryctolagus cuniculus ENSOCUG00000022109 I 0.000
ENSOCUG00000001138 Oryctolagus cuniculus ENSOCUG00000001138 I 0.000
ENSOARG00000015571 Ovis aries ENSOARG00000015571 I 0.000
TP53 Pan troglodytes ENSPTRG00000008703 I 0.000
Tp53 Rattus norvegicus ENSRNOG00000010756 I 0.000
ENSP00000269305 Macaca fascicularis ENSP00000269305 I 0.000
ENSBTAP00000001420-D1 Bos grunniens ENSBTAP00000001420-D1 I 0.000
Cmyd_10000491 Chelonia mydas Cmyd_10000491 I 0.000
TP53 Tursiops truncatus ENSTTRG00000010250 I 0.000
ENSSTOG00000022774 Ictidomys tridecemlineatus ENSSTOG00000022774 I 0.000
TP53 Sus scrofa ENSSSCG00000017950 I 0.000
ENSSHAG00000015510 Sarcophilus harrisii ENSSHAG00000015510 I 0.000
TP53 Sorex araneus ENSSARG00000006206 I 0.000
LOC100910954 Rattus norvegicus ENSRNOG00000046657 I 0.000
Myotis_brandtii_TP53_10021059 Myotis brandtii Myotis_brandtii_TP53_10021059 I 0.000
ENSMPUG00000009017 Mustela putorius furo ENSMPUG00000009017 I 0.000
TP53 Macaca mulatta ENSMMUG00000008639 I 0.000
TP53 Equus caballus ENSECAG00000008126 I 0.000
TP53 Dasypus novemcinctus ENSDNOG00000005252 I 0.000
ENSCSAG00000011345 Chlorocebus sabaeus ENSCSAG00000011345 I 0.000
TP53 Cavia porcellus ENSCPOG00000014252 I 0.000
TP53 Callithrix jacchus ENSCJAG00000014978 I 0.000
TP53 Canis familiaris ENSCAFG00000016714 I 0.000
TP53 Bos taurus ENSBTAG00000001069 I 0.000
ENSAMEG00000016851 Ailuropoda melanoleuca ENSAMEG00000016851 I 0.000
TP53 Erinaceus europaeus ENSEEUG00000014573 I 0.000
ENSETEG00000008987 Echinops telfairi ENSETEG00000008987 I 0.000
TP53 Felis catus ENSFCAG00000009623 I 0.000
ENSMLUG00000025140 Myotis lucifugus ENSMLUG00000025140 I 0.000
ENSMLUG00000006411 Myotis lucifugus ENSMLUG00000006411 I 0.000
TP53 Microcebus murinus ENSMICG00000014853 I 0.000
ENSMEUG00000013135 Macropus eugenii ENSMEUG00000013135 I 0.000
ENSLAFG00000032042 Loxodonta africana ENSLAFG00000032042 I 0.000
ENSLAFG00000028299 Loxodonta africana ENSLAFG00000028299 I 0.000
ENSLAFG00000007483 Loxodonta africana ENSLAFG00000007483 I 0.000
TP53 Gorilla gorilla ENSGGOG00000009786 I 0.000
ENSACAG00000022533 Anolis carolinensis ENSACAG00000022533 I 0.000