Pm030197 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm030197 T283657_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK19621.1
M01280_2.00
Cannabis sativa
NNTTATCYN

NRGATAANN
PBM
Lambert et al.(2019)
pTH10140
0.743 0.826
AT1G49010
M01269_2.00
Arabidopsis thaliana
NNYWATCNN

NNGATWRNN
PBM
Lambert et al.(2019)
pTH11535
0.690 0.761
AT1G49010
M07022_2.00
Arabidopsis thaliana
NHHWWYCTTATCYWH

DWRGATAAGRWWDDN
Dap-seq
OMalley et al.(2016)
At1g49010_col_a
0.690 0.761
AT1G49010
M07023_2.00
Arabidopsis thaliana
WWYCTTATCYWHWHH

DDWDWRGATAAGRWW
Dap-seq
OMalley et al.(2016)
At1g49010_colamp_a
0.690 0.761
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm030197 Myb 134 179

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

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30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action