CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29576.m000224
(
Ricinus communis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
29576.m000224
T283747_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29576.m000224
Myb
98
138
DVTFRDASVKGPLWDEVSRKLAELGYNRSAKKCKEKFENVF
29576.m000224
Myb
479
538
SSRWPKVEVQALIDLRTNLDSKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENIN
Links
Other
Myb/SANT
family TFs
Other
Ricinus communis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr8G11760_001
Musa acuminata
GSMUA_Achr8G11760_001
N
0.772
GSMUA_Achr4G29130_001
Musa acuminata
GSMUA_Achr4G29130_001
N
0.726
cassava19027.valid.m1
Manihot esculenta
cassava19027.valid.m1
N
0.707
Eucgr.F02707
Eucalyptus grandis
Eucgr.F02707
N
0.689
OS04G0541100
Oryza sativa
OS04G0541100
N
0.682
Lus10018887.g
Linum usitatissimum
Lus10018887.g
N
0.673
Lus10029778.g
Linum usitatissimum
Lus10029778.g
N
0.664
Aquca_023_00132
Aquilegia coerulea
Aquca_023_00132
I
0.663