29790.m000831 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29790.m000831 T283791_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.734 0.766
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.734 0.766
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.668 0.745
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.668 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29790.m000831 Myb 202 253

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

Invalid Input OrderBy

149 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action