29848.m004559 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29848.m004559 T283818_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARR1
M02296_2.00
Arabidopsis thaliana
NDGATHYBNN

NNVRDATCHN
PBM
Weirauch et al.(2014)
pTH8257
0.807 0.894
ARR1
M02297_2.00
Arabidopsis thaliana
NAAGATHCKN

NMGDATCTTN
PBM
Weirauch et al.(2014)
pTH8590
0.805 0.894
ARR10
M02702_2.00
Arabidopsis thaliana
AGATHYKN

NMRDATCT
SELEX
Mathelier et al.(2014)
MA0121.1
0.737 0.809
ARR10
M11045_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ARR10_01
0.737 0.809
ARR18
M02313_2.00
Arabidopsis thaliana
NNNNAGATAYGNN

NNCRTATCTNNNN
PBM
Weirauch et al.(2014)
pTH8840
0.717 0.851
PK07924.1
M01278_2.00
Cannabis sativa
NGATHYNNN

NNNRDATCN
PBM
Lambert et al.(2019)
pTH11431
0.695 0.851
e_gw1.362.4.1
M02341_2.00
Physcomitrella patens
NNNRDATCNN

NNGATHYNNN
PBM
Weirauch et al.(2014)
pTH8461
0.694 0.830
estExt_fgenesh1_pg.C_Chr_16.00010090
M02367_2.00
Ostreococcus tauri
NNNDATCN

NGATHNNN
PBM
Weirauch et al.(2014)
pTH9644
0.668 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29848.m004559 Myb 198 248

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

Invalid Input OrderBy

386 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action