29889.m003258 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29889.m003258 T283820_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYBP_MAIZE
M11057_2.00 		Zea mays
ACCWACCHN
NDGGTWGGT		 Transfac
Matys et al.(2006)
P$P_01 		0.717 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29889.m003258 Myb 14 61
29889.m003258 Myb 67 95

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
evm.TU.supercontig_18.16 Carica papaya evm.TU.supercontig_18.16 I 0.836
cassava34998.m1 Manihot esculenta cassava34998.m1 I 0.786
Pavir.Ia03542 Panicum virgatum Pavir.Ia03542 I 0.744
LjSGA_102038.1 Lotus japonicus LjSGA_102038.1 I 0.743
30076.m004682 Ricinus communis 30076.m004682 I 0.732
MYBP_MAIZE Zea mays MYBP_MAIZE D 0.717
GRMZM2G016020 Zea mays GRMZM2G016020 I 0.710
CM0385.290.nd Lotus japonicus CM0385.290.nd I 0.710
GRMZM2G129872 Zea mays GRMZM2G129872 I 0.710
Pavir.J12840 Panicum virgatum Pavir.J12840 N 0.692
GLYMA19G24451 Glycine max GLYMA19G24451 N 0.692
Pavir.Eb01225 Panicum virgatum Pavir.Eb01225 N 0.692
Pavir.J22834 Panicum virgatum Pavir.J22834 N 0.689
Pavir.Ea01343 Panicum virgatum Pavir.Ea01343 I 0.686
F775_20860 Aegilops tauschii F775_20860 I 0.685
GRMZM2G051256 Zea mays GRMZM2G051256 I 0.679
ORUFI03G21780 Oryza rufipogon ORUFI03G21780 N 0.678
OLONG_002280 Oryza longistaminata OLONG_002280 I 0.677
Cagra.0551s0003 Capsella grandiflora Cagra.0551s0003 I 0.665
mgf024704m Mimulus guttatus mgf024704m N 0.664
TRIUR3_10933 Triticum urartu TRIUR3_10933 N 0.664
GRMZM2G077789 Zea mays GRMZM2G077789 I 0.662
BGIOSGA010547 Oryza indica BGIOSGA010547 N 0.661