29933.m001454 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 29933.m001454 T283842_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29933.m001454 Myb 15 62
29933.m001454 Myb 68 113

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_033015 Theobroma cacao TCM_033015 N 0.771
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.767
29933.m001453 Ricinus communis 29933.m001453 N 0.748
TCM_030020 Theobroma cacao TCM_030020 I 0.746
TCM_033016 Theobroma cacao TCM_033016 N 0.745
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.743
MDP0000131822 Malus domestica MDP0000131822 I 0.738
MDP0000289283 Malus domestica MDP0000289283 I 0.737
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.736
Pm009880 Prunus mume Pm009880 N 0.735
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.731
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.730
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.729
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.728
PRUPE_ppa015081mg Prunus persica PRUPE_ppa015081mg N 0.725
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.723
gene30736-v1.0-hybrid Fragaria vesca gene30736-v1.0-hybrid N 0.723
Gorai.013G143000 Gossypium raimondii Gorai.013G143000 N 0.720
Gorai.013G143100 Gossypium raimondii Gorai.013G143100 N 0.718
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.713
VIT_00s0203g00170 Vitis vinifera VIT_00s0203g00170 N 0.713
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.713
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.712
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.711
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.710
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.710
Gorai.013G143200 Gossypium raimondii Gorai.013G143200 I 0.709
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.709
SapurV1A.0028s0640 Salix purpurea SapurV1A.0028s0640 N 0.707
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.702
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.700
POPTR_0011s04000 Populus trichocarpa POPTR_0011s04000 N 0.700
MDP0000407613 Malus domestica MDP0000407613 N 0.694
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.694
MDP0000155426 Malus domestica MDP0000155426 I 0.694
Eucgr.L02563 Eucalyptus grandis Eucgr.L02563 N 0.693
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.692
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.692
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.692
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.691
TCM_007865 Theobroma cacao TCM_007865 I 0.691
Pm015302 Prunus mume Pm015302 N 0.690
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.690
Eucgr.D00044 Eucalyptus grandis Eucgr.D00044 N 0.689
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.686
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.686
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.684
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.681
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.681
cassava26894.m1 Manihot esculenta cassava26894.m1 N 0.680
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.679
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.677
GLYMA12G32530 Glycine max GLYMA12G32530 I 0.677
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.676
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.676
Eucgr.D00050 Eucalyptus grandis Eucgr.D00050 N 0.676
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.675
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.675
TCM_020889 Theobroma cacao TCM_020889 I 0.674
PK20358.1 Cannabis sativa PK20358.1 I 0.673
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.673
TCM_007868 Theobroma cacao TCM_007868 I 0.673
PK24260.1 Cannabis sativa PK24260.1 N 0.671
GLYMA02G00820 Glycine max GLYMA02G00820 I 0.670
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.670
GLYMA10G00930 Glycine max GLYMA10G00930 I 0.670
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.669
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.669
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.668
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.667
cassava47180.m1 Manihot esculenta cassava47180.m1 I 0.667
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.667
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.666
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.665
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.665
Cla006077 Citrullus lanatus Cla006077 I 0.664
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.664
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.664
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.664
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.664
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.664
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.664
TCM_004046 Theobroma cacao TCM_004046 I 0.664
PGSC0003DMG400042926 Solanum tuberosum PGSC0003DMG400042926 N 0.663
Solyc03g093930.2 Solanum lycopersicum Solyc03g093930.2 N 0.663
TCM_026197 Theobroma cacao TCM_026197 I 0.663
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.663
Eucgr.D00037 Eucalyptus grandis Eucgr.D00037 N 0.663
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.663
chr3.LjT47O18.70.nc Lotus japonicus chr3.LjT47O18.70.nc N 0.662
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.661
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I 0.661