30005.m001261 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30005.m001261 T283851_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
30005.m001261 Myb 61 110

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.868
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.837
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.830
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.828
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.801
Bra040015 Brassica rapa Bra040015 N 0.801
Bra001258 Brassica rapa Bra001258 N 0.801
Bo3g061340 Brassica oleracea Bo3g061340 N 0.801
Bra029658 Brassica rapa Bra029658 N 0.801
Bo1g147290 Brassica oleracea Bo1g147290 N 0.786
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N 0.774
TCM_002550 Theobroma cacao TCM_002550 N 0.770
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.766
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.764
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.752
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.752
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.752
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N 0.752
OLONG_009317 Oryza longistaminata OLONG_009317 N 0.752
OBART04G17310 Oryza barthii OBART04G17310 N 0.752
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.752
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.752
mgf025428m Mimulus guttatus mgf025428m N 0.750
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N 0.741
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.740
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.737
F775_32546 Aegilops tauschii F775_32546 N 0.737
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.737
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.737
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.722
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.722
Si010917m.g Setaria italica Si010917m.g N 0.722
AT3G07565 Arabidopsis thaliana AT3G07565 N 0.719
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.719
LPERR04G13890 Leersia perrieri LPERR04G13890 N 0.718
Carubv10014434m.g Capsella rubella Carubv10014434m.g N 0.712
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N 0.712
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N 0.712
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N 0.712
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.707
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.707
Pavir.J08977 Panicum virgatum Pavir.J08977 N 0.701
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.701
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.701
Aquca_108_00051 Aquilegia coerulea Aquca_108_00051 N 0.693
GSMUA_Achr9G08210_001 Musa acuminata GSMUA_Achr9G08210_001 N 0.689
mgf000871m Mimulus guttatus mgf000871m N 0.689
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.688
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.684
Cla012999 Citrullus lanatus Cla012999 N 0.675
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N 0.671
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N 0.670
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N 0.666
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N 0.666