30155.m001616 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30155.m001616 T283896_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G04760
M02304_2.00
Arabidopsis thaliana
NDGATAAGGN

NCCTTATCHN
PBM
Weirauch et al.(2014)
pTH7079
0.671 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30155.m001616 Myb 116 163

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava44314.m1 Manihot esculenta cassava44314.m1 N 0.699
Bo2g006670 Brassica oleracea Bo2g006670 I 0.688
Bra028780 Brassica rapa Bra028780 I 0.680
Bostr.13129s0486 Boechera stricta Bostr.13129s0486 I 0.677
Bra009432 Brassica rapa Bra009432 I 0.677
Bo9g178980 Brassica oleracea Bo9g178980 I 0.677
Cagra.5249s0014 Capsella grandiflora Cagra.5249s0014 I 0.671
Carubv10003623m.g Capsella rubella Carubv10003623m.g I 0.671
Bo3g002960 Brassica oleracea Bo3g002960 I 0.671
AT5G04760 Arabidopsis thaliana AT5G04760 D 0.671
scaffold_600421.1 Arabidopsis lyrata scaffold_600421.1 I 0.671
Bra005818 Brassica rapa Bra005818 I 0.671