cassava11204.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava11204.m1 T283971_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PK26523.1
M01283_2.00
Cannabis sativa
NWHATTCYNN

NNRGAATDWN
PBM
Lambert et al.(2019)
pTH11304
0.708 0.787
AT2G40260
M07057_2.00
Arabidopsis thaliana
HHWDWAHATTCYHTN

NADRGAATDTWHWDD
Dap-seq
OMalley et al.(2016)
AT2G40260_col_a
0.702 0.766
AT2G40260
M07058_2.00
Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT

ADRGAATDTWHHNDDWHHNN
Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a
0.702 0.766
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.672 0.787
PHR1
M02302_2.00
Arabidopsis thaliana
NWKATNCBNN

NNVGNATMWN
PBM
Weirauch et al.(2014)
pTH7249
0.666 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava11204.m1 Myb 58 109

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.3361s0010 Salix purpurea SapurV1A.3361s0010 I 0.823
SapurV1A.0429s0100 Salix purpurea SapurV1A.0429s0100 I 0.823
cassava15362.m1 Manihot esculenta cassava15362.m1 I 0.802
PRUPE_ppa015662mg Prunus persica PRUPE_ppa015662mg I 0.802
29842.m003572 Ricinus communis 29842.m003572 I 0.784
SapurV1A.0067s0500 Salix purpurea SapurV1A.0067s0500 I 0.780
GLYMA09G00685 Glycine max GLYMA09G00685 I 0.766
GLYMA15G11576 Glycine max GLYMA15G11576 I 0.766
Ca_00645 Cicer arietinum Ca_00645 I 0.766
POPTR_0004s01060 Populus trichocarpa POPTR_0004s01060 I 0.763
TCM_030248 Theobroma cacao TCM_030248 I 0.763
MTR_2g023580 Medicago truncatula MTR_2g023580 I 0.758
POPTR_0021s00430 Populus trichocarpa POPTR_0021s00430 I 0.751
chr5.LjT14K23.60.nc Lotus japonicus chr5.LjT14K23.60.nc I 0.750
GLYMA20G24290 Glycine max GLYMA20G24290 I 0.750
orange1.1g029903m.g Citrus sinensis orange1.1g029903m.g I 0.749
Pm009670 Prunus mume Pm009670 I 0.749
Ciclev10032941m.g Citrus clementina Ciclev10032941m.g I 0.749
PDK_20s1498711g001 Phoenix dactylifera PDK_20s1498711g001 I 0.749
Lus10001149.g Linum usitatissimum Lus10001149.g I 0.745
Gorai.010G181100 Gossypium raimondii Gorai.010G181100 I 0.745
gene19641-v1.0-hybrid Fragaria vesca gene19641-v1.0-hybrid I 0.743
Eucgr.D01346 Eucalyptus grandis Eucgr.D01346 I 0.739
Bostr.24340s0004 Boechera stricta Bostr.24340s0004 I 0.732
LjT01P07.20.nd Lotus japonicus LjT01P07.20.nd I 0.731
Cla014669 Citrullus lanatus Cla014669 I 0.731
Cucsa.045140 Cucumis sativus Cucsa.045140 I 0.731
MDP0000312944 Malus domestica MDP0000312944 I 0.729
Traes_4AL_72ECC7747 Triticum aestivum Traes_4AL_72ECC7747 I 0.726
LPERR11G00400 Leersia perrieri LPERR11G00400 I 0.726
Traes_4DS_99EC36CD4 Triticum aestivum Traes_4DS_99EC36CD4 I 0.726
TRIUR3_10881 Triticum urartu TRIUR3_10881 I 0.726
F775_29879 Aegilops tauschii F775_29879 I 0.726
29814.m000747 Ricinus communis 29814.m000747 I 0.723
Gorai.009G329400 Gossypium raimondii Gorai.009G329400 I 0.723
VIT_00s1624g00010 Vitis vinifera VIT_00s1624g00010 I 0.722
Pm014775 Prunus mume Pm014775 I 0.720
Pavir.J01622 Panicum virgatum Pavir.J01622 I 0.720
Pavir.J16957 Panicum virgatum Pavir.J16957 I 0.720
gene00600-v1.0-hybrid Fragaria vesca gene00600-v1.0-hybrid I 0.719
MLOC_56821 Hordeum vulgare MLOC_56821 I 0.716
MDP0000217637 Malus domestica MDP0000217637 I 0.712
evm.TU.supercontig_2794.2 Carica papaya evm.TU.supercontig_2794.2 I 0.710
Pavir.Ia04483 Panicum virgatum Pavir.Ia04483 I 0.708
POPTR_0010s19310 Populus trichocarpa POPTR_0010s19310 I 0.708
cassava41268.m1 Manihot esculenta cassava41268.m1 I 0.708
orange1.1g041956m.g Citrus sinensis orange1.1g041956m.g I 0.708
Aquca_002_01368 Aquilegia coerulea Aquca_002_01368 I 0.708
POPTR_0010s10990 Populus trichocarpa POPTR_0010s10990 I 0.708
Pavir.Ib00180 Panicum virgatum Pavir.Ib00180 I 0.708
POPTR_0001s28690 Populus trichocarpa POPTR_0001s28690 I 0.708
PGSC0003DMG400029440 Solanum tuberosum PGSC0003DMG400029440 I 0.708
VIT_01s0137g00050 Vitis vinifera VIT_01s0137g00050 I 0.708
Ciclev10029989m.g Citrus clementina Ciclev10029989m.g I 0.708
PRUPE_ppa025397mg Prunus persica PRUPE_ppa025397mg I 0.708
POPTR_0009s07890 Populus trichocarpa POPTR_0009s07890 I 0.708
Sb01g048420 Sorghum bicolor Sb01g048420 I 0.708
TCM_042463 Theobroma cacao TCM_042463 I 0.708
cassava20298.m1 Manihot esculenta cassava20298.m1 I 0.708
29780.m001368 Ricinus communis 29780.m001368 I 0.708
TCM_011166 Theobroma cacao TCM_011166 I 0.708
Pm018961 Prunus mume Pm018961 I 0.708
27757.m000022 Ricinus communis 27757.m000022 I 0.708
evm.TU.supercontig_19.148 Carica papaya evm.TU.supercontig_19.148 I 0.708
Si036127m.g Setaria italica Si036127m.g I 0.708
cassava33845.m1 Manihot esculenta cassava33845.m1 I 0.708
Gorai.009G112300 Gossypium raimondii Gorai.009G112300 I 0.708
ORUFI10G18320 Oryza rufipogon ORUFI10G18320 I 0.708
AMTR_s00021p00013790 Amborella trichopoda AMTR_s00021p00013790 I 0.708
cassava21831.m1 Manihot esculenta cassava21831.m1 I 0.708
TCM_042189 Theobroma cacao TCM_042189 I 0.708
ORGLA10G0122800 Oryza glaberrima ORGLA10G0122800 I 0.708
GSMUA_Achr5G19200_001 Musa acuminata GSMUA_Achr5G19200_001 I 0.708
ORUFI03G02110 Oryza rufipogon ORUFI03G02110 I 0.708
GSMUA_Achr11G01510_001 Musa acuminata GSMUA_Achr11G01510_001 I 0.708
GSMUA_Achr7G22410_001 Musa acuminata GSMUA_Achr7G22410_001 I 0.708
LPERR03G02180 Leersia perrieri LPERR03G02180 I 0.708
OB03G12320 Oryza brachyantha OB03G12320 I 0.708
SapurV1A.0042s0270 Salix purpurea SapurV1A.0042s0270 I 0.708
LPERR10G13190 Leersia perrieri LPERR10G13190 I 0.708
GRMZM5G887276 Zea mays GRMZM5G887276 I 0.708
GRMZM2G374986 Zea mays GRMZM2G374986 I 0.708
PK26523.1 Cannabis sativa PK26523.1 D 0.708
BGIOSGA031479 Oryza indica BGIOSGA031479 I 0.708
BGIOSGA011527 Oryza indica BGIOSGA011527 I 0.708
PK23854.1 Cannabis sativa PK23854.1 I 0.708
SapurV1A.0905s0010 Salix purpurea SapurV1A.0905s0010 I 0.708
SapurV1A.0203s0150 Salix purpurea SapurV1A.0203s0150 I 0.708
SapurV1A.0650s0140 Salix purpurea SapurV1A.0650s0140 I 0.708
OB10G24340 Oryza brachyantha OB10G24340 I 0.708
GSMUA_Achr2G11010_001 Musa acuminata GSMUA_Achr2G11010_001 I 0.708
OMERI03G02220 Oryza meridionalis OMERI03G02220 I 0.708
OLONG_011732 Oryza longistaminata OLONG_011732 I 0.708
OLONG_004539 Oryza longistaminata OLONG_004539 I 0.708
OGLUM03G02310 Oryza glumaepatula OGLUM03G02310 I 0.708
ONIVA03G01980 Oryza nivara ONIVA03G01980 I 0.708
ONIVA10G19340 Oryza nivara ONIVA10G19340 I 0.708
evm.TU.supercontig_2.82 Carica papaya evm.TU.supercontig_2.82 I 0.708
ORGLA03G0021400 Oryza glaberrima ORGLA03G0021400 I 0.708
OPUNC10G15550 Oryza punctata OPUNC10G15550 I 0.708
OPUNC03G02160 Oryza punctata OPUNC03G02160 I 0.708
OBART10G17270 Oryza barthii OBART10G17270 I 0.708
OMERI10G13750 Oryza meridionalis OMERI10G13750 I 0.708
OB11G10130 Oryza brachyantha OB11G10130 I 0.708
OBART03G02370 Oryza barthii OBART03G02370 I 0.708
OB12G10410 Oryza brachyantha OB12G10410 I 0.708
F775_13531 Aegilops tauschii F775_13531 I 0.704
TRIUR3_11585 Triticum urartu TRIUR3_11585 I 0.704
MLOC_72013 Hordeum vulgare MLOC_72013 I 0.704
Traes_5BL_0C6735099 Triticum aestivum Traes_5BL_0C6735099 I 0.704
Bostr.0556s0031 Boechera stricta Bostr.0556s0031 I 0.703
Thhalv10004791m.g Eutrema salsugineum Thhalv10004791m.g I 0.703
fgenesh2_kg.5__121__AT2G02060.1 Arabidopsis lyrata fgenesh2_kg.5__121__AT2G02060.1 I 0.703
AT2G02060 Arabidopsis thaliana AT2G02060 I 0.703
Bra026618 Brassica rapa Bra026618 I 0.703
Cagra.0549s0004 Capsella grandiflora Cagra.0549s0004 I 0.703
Carubv10017538m.g Capsella rubella Carubv10017538m.g I 0.703
VIT_13s0067g01500 Vitis vinifera VIT_13s0067g01500 I 0.703
Bra000180 Brassica rapa Bra000180 I 0.702
Carubv10023302m.g Capsella rubella Carubv10023302m.g I 0.702
Si026524m.g Setaria italica Si026524m.g I 0.702
Bo3g034850 Brassica oleracea Bo3g034850 I 0.702
AT2G40260 Arabidopsis thaliana AT2G40260 D 0.702
Sb08g000510 Sorghum bicolor Sb08g000510 I 0.702
Bo4g188940 Brassica oleracea Bo4g188940 I 0.702
Si010342m.g Setaria italica Si010342m.g I 0.702
Thhalv10016733m.g Eutrema salsugineum Thhalv10016733m.g I 0.702
Cagra.7053s0009 Capsella grandiflora Cagra.7053s0009 I 0.702
MDP0000617021 Malus domestica MDP0000617021 I 0.702
Eucgr.J00182 Eucalyptus grandis Eucgr.J00182 I 0.702
fgenesh1_pm.C_scaffold_4001775 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001775 I 0.702
POPTR_0016s12940 Populus trichocarpa POPTR_0016s12940 I 0.702
BRADI4G44930 Brachypodium distachyon BRADI4G44930 I 0.702
GRMZM5G846506 Zea mays GRMZM5G846506 I 0.702
Lus10029808.g Linum usitatissimum Lus10029808.g I 0.701
Thhalv10017090m.g Eutrema salsugineum Thhalv10017090m.g I 0.700
GSMUA_Achr4G25920_001 Musa acuminata GSMUA_Achr4G25920_001 I 0.698
gene02359-v1.0-hybrid Fragaria vesca gene02359-v1.0-hybrid N 0.698
VIT_06s0004g07000 Vitis vinifera VIT_06s0004g07000 I 0.698
POPTR_0008s07170 Populus trichocarpa POPTR_0008s07170 I 0.697
Bra024836 Brassica rapa Bra024836 I 0.697
SapurV1A.0061s0540 Salix purpurea SapurV1A.0061s0540 I 0.697
BRADI1G71910 Brachypodium distachyon BRADI1G71910 I 0.697
Bo7g080160 Brassica oleracea Bo7g080160 I 0.697
Bo2g134900 Brassica oleracea Bo2g134900 I 0.696
Lus10040945.g Linum usitatissimum Lus10040945.g I 0.694
Solyc02g080860.1 Solanum lycopersicum Solyc02g080860.1 I 0.692
MDP0000196504 Malus domestica MDP0000196504 I 0.692
MDP0000214282 Malus domestica MDP0000214282 I 0.692
SapurV1A.0015s0960 Salix purpurea SapurV1A.0015s0960 I 0.690
orange1.1g020303m.g Citrus sinensis orange1.1g020303m.g I 0.690
Gorai.002G169300 Gossypium raimondii Gorai.002G169300 I 0.690
Eucgr.B02627 Eucalyptus grandis Eucgr.B02627 I 0.690
Traes_1BL_E2629CBC1 Triticum aestivum Traes_1BL_E2629CBC1 I 0.690
MTR_0223s0040 Medicago truncatula MTR_0223s0040 I 0.690
Ca_14800 Cicer arietinum Ca_14800 I 0.690
Ca_05422 Cicer arietinum Ca_05422 I 0.690
cassava27240.m1 Manihot esculenta cassava27240.m1 I 0.690
GSMUA_AchrUn_randomG06480_001 Musa acuminata GSMUA_AchrUn_randomG06480_001 I 0.690
MTR_1g112370 Medicago truncatula MTR_1g112370 I 0.690
Ciclev10005466m.g Citrus clementina Ciclev10005466m.g I 0.690
GLYMA07G19585 Glycine max GLYMA07G19585 I 0.690
GLYMA20G00861 Glycine max GLYMA20G00861 I 0.690
SELMODRAFT_438636 Selaginella moellendorffii SELMODRAFT_438636 I 0.689
SELMODRAFT_426960 Selaginella moellendorffii SELMODRAFT_426960 I 0.689
POPTR_0002s05770 Populus trichocarpa POPTR_0002s05770 I 0.689
Thhalv10008620m.g Eutrema salsugineum Thhalv10008620m.g I 0.688
MDP0000244794 Malus domestica MDP0000244794 I 0.686
MDP0000234120 Malus domestica MDP0000234120 I 0.684
MDP0000321302 Malus domestica MDP0000321302 I 0.684
POPTR_0008s14140 Populus trichocarpa POPTR_0008s14140 I 0.683
GSMUA_Achr5G00310_001 Musa acuminata GSMUA_Achr5G00310_001 N 0.681
mgf019744m Mimulus guttatus mgf019744m I 0.678
Pm010236 Prunus mume Pm010236 I 0.678
Lus10002207.g Linum usitatissimum Lus10002207.g I 0.677
Lus10012239.g Linum usitatissimum Lus10012239.g I 0.677
Ca_08598 Cicer arietinum Ca_08598 I 0.677
GLYMA15G08970 Glycine max GLYMA15G08970 I 0.677
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.676
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.676
Aquca_034_00282 Aquilegia coerulea Aquca_034_00282 I 0.676
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.676
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.676
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.676
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.676
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.676
TCM_027630 Theobroma cacao TCM_027630 I 0.676
Bo5g019810 Brassica oleracea Bo5g019810 I 0.672
fgenesh2_kg.1__1592__AT1G14600.1 Arabidopsis lyrata fgenesh2_kg.1__1592__AT1G14600.1 I 0.672
Carubv10010057m.g Capsella rubella Carubv10010057m.g I 0.672
Bra026202 Brassica rapa Bra026202 I 0.672
Cagra.3501s0036 Capsella grandiflora Cagra.3501s0036 I 0.672
AT1G14600 Arabidopsis thaliana AT1G14600 D 0.672
GLYMA13G30154 Glycine max GLYMA13G30154 I 0.671
MTR_8g086410 Medicago truncatula MTR_8g086410 I 0.671
estExt_fgenesh1_pg.C_550102 Physcomitrella patens estExt_fgenesh1_pg.C_550102 I 0.671
SELMODRAFT_424890 Selaginella moellendorffii SELMODRAFT_424890 I 0.671
SELMODRAFT_423935 Selaginella moellendorffii SELMODRAFT_423935 I 0.671
POPTR_0018s14830 Populus trichocarpa POPTR_0018s14830 I 0.669
Solyc04g008480.1 Solanum lycopersicum Solyc04g008480.1 I 0.668
BRADI4G26800 Brachypodium distachyon BRADI4G26800 I 0.667
GRMZM2G069525 Zea mays GRMZM2G069525 I 0.667
PRUPE_ppa023518mg Prunus persica PRUPE_ppa023518mg I 0.667
PHR1 Arabidopsis thaliana AT4G28610 D 0.666
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.666
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.666
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.666
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.666
mgf017043m Mimulus guttatus mgf017043m I 0.662
Sb05g000480 Sorghum bicolor Sb05g000480 I 0.662