cassava12253.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava12253.valid.m1 T283987_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava12253.valid.m1 Myb 156 207

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr5.LjT42I01.50.nd Lotus japonicus chr5.LjT42I01.50.nd I 0.822
Ca_14198 Cicer arietinum Ca_14198 N 0.762
MDP0000184307 Malus domestica MDP0000184307 N 0.749
POPTR_0016s04830 Populus trichocarpa POPTR_0016s04830 N 0.749
PRUPE_ppa016067mg Prunus persica PRUPE_ppa016067mg N 0.749
MDP0000253656 Malus domestica MDP0000253656 N 0.749
Pm025973 Prunus mume Pm025973 N 0.749
gene22647-v1.0-hybrid Fragaria vesca gene22647-v1.0-hybrid N 0.749
PK00827.1 Cannabis sativa PK00827.1 N 0.749
28582.m000318 Ricinus communis 28582.m000318 N 0.748
MDP0000280005 Malus domestica MDP0000280005 N 0.743
cassava39743.m1 Manihot esculenta cassava39743.m1 N 0.731
Cucsa.353890 Cucumis sativus Cucsa.353890 N 0.731
cassava12255.valid.m1 Manihot esculenta cassava12255.valid.m1 N 0.731
Thhalv10013850m.g Eutrema salsugineum Thhalv10013850m.g N 0.731
AT5G06800 Arabidopsis thaliana AT5G06800 N 0.731
SapurV1A.0251s0040 Salix purpurea SapurV1A.0251s0040 N 0.731
30226.m001993 Ricinus communis 30226.m001993 N 0.731
SapurV1A.0018s0530 Salix purpurea SapurV1A.0018s0530 N 0.731
Lus10021035.g Linum usitatissimum Lus10021035.g N 0.731
orange1.1g018583m.g Citrus sinensis orange1.1g018583m.g N 0.731
Gorai.002G225400 Gossypium raimondii Gorai.002G225400 N 0.731
Ciclev10012014m.g Citrus clementina Ciclev10012014m.g N 0.731
Cagra.8005s0016 Capsella grandiflora Cagra.8005s0016 N 0.731
Carubv10003217m.g Capsella rubella Carubv10003217m.g N 0.731
Bostr.13129s0292 Boechera stricta Bostr.13129s0292 N 0.731
cassava12254.valid.m1 Manihot esculenta cassava12254.valid.m1 N 0.731
Bo9g175820 Brassica oleracea Bo9g175820 I 0.731
Bra009228 Brassica rapa Bra009228 I 0.731
fgenesh2_kg.6__627__AT5G06800.1 Arabidopsis lyrata fgenesh2_kg.6__627__AT5G06800.1 N 0.731
TCM_024886 Theobroma cacao TCM_024886 N 0.731
Bra028717 Brassica rapa Bra028717 N 0.731
28582.m000316 Ricinus communis 28582.m000316 N 0.731
Cla011853 Citrullus lanatus Cla011853 N 0.731
Bo2g007410 Brassica oleracea Bo2g007410 N 0.731
Lus10023816.g Linum usitatissimum Lus10023816.g N 0.730
28582.m000317 Ricinus communis 28582.m000317 N 0.729
Bo3g004040 Brassica oleracea Bo3g004040 N 0.725
Bra005912 Brassica rapa Bra005912 N 0.725
MTR_1g053835 Medicago truncatula MTR_1g053835 N 0.723
GLYMA09G17404 Glycine max GLYMA09G17404 N 0.723
POPTR_0006s20540 Populus trichocarpa POPTR_0006s20540 N 0.723
Gorai.006G142000 Gossypium raimondii Gorai.006G142000 N 0.716
evm.TU.supercontig_85.82 Carica papaya evm.TU.supercontig_85.82 N 0.716
GLYMA19G32850 Glycine max GLYMA19G32850 I 0.715
GLYMA03G29940 Glycine max GLYMA03G29940 I 0.715
MTR_7g093030 Medicago truncatula MTR_7g093030 N 0.715
Eucgr.A02444 Eucalyptus grandis Eucgr.A02444 N 0.711
mgf007985m Mimulus guttatus mgf007985m N 0.706
mgf007532m Mimulus guttatus mgf007532m N 0.706
mgf017208m Mimulus guttatus mgf017208m N 0.701
GLYMA02G30800 Glycine max GLYMA02G30800 N 0.683
orange1.1g035950m.g Citrus sinensis orange1.1g035950m.g N 0.682
Solyc10g078720.1 Solanum lycopersicum Solyc10g078720.1 N 0.682
Aquca_009_00165 Aquilegia coerulea Aquca_009_00165 N 0.682
PGSC0003DMG400011435 Solanum tuberosum PGSC0003DMG400011435 N 0.682
Ciclev10033388m.g Citrus clementina Ciclev10033388m.g N 0.682
Aquca_012_00204 Aquilegia coerulea Aquca_012_00204 N 0.682
Ca_07304 Cicer arietinum Ca_07304 I 0.674
POPTR_0453s00230 Populus trichocarpa POPTR_0453s00230 N 0.666