cassava19434.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava19434.valid.m1 T284050_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN

NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.767 0.915
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.662 0.660
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.662 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19434.valid.m1 Myb 154 204

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT5G05090 Arabidopsis thaliana AT5G05090 D 0.767
ARR14 Arabidopsis thaliana AT2G01760 D 0.662
Cagra.2235s0034 Capsella grandiflora Cagra.2235s0034 I 0.662
mgf001591m Mimulus guttatus mgf001591m I 0.672
mgf008790m Mimulus guttatus mgf008790m I 0.742
mgf010113m Mimulus guttatus mgf010113m I 0.662
mgf012203m Mimulus guttatus mgf012203m I 0.662
mgf014801m Mimulus guttatus mgf014801m I 0.767
mgf014863m Mimulus guttatus mgf014863m I 0.672
gw1.37.160.1 Volvox carteri gw1.37.160.1 I 0.685
gw1.29.165.1 Physcomitrella patens gw1.29.165.1 I 0.806
gw1.29.164.1 Physcomitrella patens gw1.29.164.1 I 0.806
gw1.27.80.1 Physcomitrella patens gw1.27.80.1 I 0.806
gw1.104.128.1 Physcomitrella patens gw1.104.128.1 I 0.806
EuGene.0000130210 Micromonas pusilla EuGene.0000130210 I 0.667
EuGene.0000090108 Micromonas pusilla EuGene.0000090108 I 0.791
est_orfs.10_1861_4270447:1 Micromonas pusilla est_orfs.10_1861_4270447:1 I 0.732
e_gw1.1.649.1 Ostreococcus RCC809 e_gw1.1.649.1 I 0.667
Aquca_003_00124 Aquilegia coerulea Aquca_003_00124 I 0.849
Aquca_003_00615 Aquilegia coerulea Aquca_003_00615 I 0.672
Cagra.1642s0062 Capsella grandiflora Cagra.1642s0062 I 0.767
Cagra.1504s0014 Capsella grandiflora Cagra.1504s0014 I 0.767
Cagra.1317s0057 Capsella grandiflora Cagra.1317s0057 I 0.847
Cagra.0995s0002 Capsella grandiflora Cagra.0995s0002 I 0.685
Cagra.0834s0003 Capsella grandiflora Cagra.0834s0003 I 0.767
Cagra.0448s0013 Capsella grandiflora Cagra.0448s0013 I 0.849
Bostr.9345s0035 Boechera stricta Bostr.9345s0035 I 0.767
Bostr.27991s0013 Boechera stricta Bostr.27991s0013 I 0.767
Bostr.26833s0280 Boechera stricta Bostr.26833s0280 I 0.815
Bostr.19424s0999 Boechera stricta Bostr.19424s0999 I 0.767
Bostr.18473s0293 Boechera stricta Bostr.18473s0293 I 0.849
Bostr.13129s0456 Boechera stricta Bostr.13129s0456 I 0.767
Aquca_091_00086 Aquilegia coerulea Aquca_091_00086 I 0.665
Aquca_009_00923 Aquilegia coerulea Aquca_009_00923 I 0.834
Aquca_009_00074 Aquilegia coerulea Aquca_009_00074 I 0.767
Cucsa.358530 Cucumis sativus Cucsa.358530 I 0.767
Cucsa.252760 Cucumis sativus Cucsa.252760 I 0.672
Cucsa.140020 Cucumis sativus Cucsa.140020 I 0.767
Ca_02989 Cicer arietinum Ca_02989 I 0.672
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I 0.672
VIT_08s0040g00900 Vitis vinifera VIT_08s0040g00900 I 0.767
VIT_06s0004g05120 Vitis vinifera VIT_06s0004g05120 I 0.849
VIT_05s0077g01480 Vitis vinifera VIT_05s0077g01480 I 0.672
ARR14 Vitis vinifera VIT_01s0011g05830 I 0.665
TRIUR3_25342 Triticum urartu TRIUR3_25342 I 0.665
Traes_4DL_2527CA8BF Triticum aestivum Traes_4DL_2527CA8BF I 0.665
Traes_4BL_941E7DE4D Triticum aestivum Traes_4BL_941E7DE4D I 0.665
Traes_4AS_6486B493A Triticum aestivum Traes_4AS_6486B493A I 0.665
TRAES3BF076800040CFD_g Triticum aestivum TRAES3BF076800040CFD_g I 0.849
TCM_045790 Theobroma cacao TCM_045790 I 0.749
TCM_041791 Theobroma cacao TCM_041791 I 0.849
TCM_021300 Theobroma cacao TCM_021300 I 0.672
TCM_011067 Theobroma cacao TCM_011067 I 0.665
Ca_07144 Cicer arietinum Ca_07144 I 0.767
Ca_16282 Cicer arietinum Ca_16282 I 0.849
Cucsa.117700 Cucumis sativus Cucsa.117700 I 0.849
cassava43032.valid.m1 Manihot esculenta cassava43032.valid.m1 I 0.672
cassava34353.m1 Manihot esculenta cassava34353.m1 I 0.909
cassava20582.m1 Manihot esculenta cassava20582.m1 I 0.767
30180.m001019 Ricinus communis 30180.m001019 I 0.767
29889.m003245 Ricinus communis 29889.m003245 I 0.672
29751.m001898 Ricinus communis 29751.m001898 I 0.909
27647.m000179 Ricinus communis 27647.m000179 I 0.665
Pm031149 Prunus mume Pm031149 I 0.767
Pm000693 Prunus mume Pm000693 I 0.849
Cla022101 Citrullus lanatus Cla022101 I 0.672
Cla017714 Citrullus lanatus Cla017714 I 0.767
Cla012286 Citrullus lanatus Cla012286 I 0.767
Cla009424 Citrullus lanatus Cla009424 I 0.672
Cla008353 Citrullus lanatus Cla008353 I 0.849
Solyc10g080960.1 Solanum lycopersicum Solyc10g080960.1 I 0.767
chr1.CM0269.130.nd Lotus japonicus chr1.CM0269.130.nd I 0.767
Pavir.Ia04946 Panicum virgatum Pavir.Ia04946 I 0.665
Pavir.Eb04079 Panicum virgatum Pavir.Eb04079 I 0.849
Pavir.Ea04181 Panicum virgatum Pavir.Ea04181 I 0.849
Pavir.Ba03246 Panicum virgatum Pavir.Ba03246 I 0.849
orange1.1g047187m.g Citrus sinensis orange1.1g047187m.g I 0.849
orange1.1g020690m.g Citrus sinensis orange1.1g020690m.g I 0.767
orange1.1g005938m.g Citrus sinensis orange1.1g005938m.g I 0.665
MDP0000846313 Malus domestica MDP0000846313 I 0.767
MDP0000672486 Malus domestica MDP0000672486 I 0.849
MDP0000669078 Malus domestica MDP0000669078 I 0.831
MDP0000290818 Malus domestica MDP0000290818 I 0.672
MDP0000224740 Malus domestica MDP0000224740 I 0.672
Lus10040780.g Linum usitatissimum Lus10040780.g I 0.820
Lus10038996.g Linum usitatissimum Lus10038996.g I 0.767
Lus10027291.g Linum usitatissimum Lus10027291.g I 0.767
Pavir.Ib00921 Panicum virgatum Pavir.Ib00921 I 0.665
Pavir.J06465 Panicum virgatum Pavir.J06465 I 0.681
PK26059.1 Cannabis sativa PK26059.1 I 0.672
PK23977.1 Cannabis sativa PK23977.1 I 0.767
PK05290.1 Cannabis sativa PK05290.1 I 0.849
Thhalv10021133m.g Eutrema salsugineum Thhalv10021133m.g I 0.767
Thhalv10017945m.g Eutrema salsugineum Thhalv10017945m.g I 0.767
Thhalv10014387m.g Eutrema salsugineum Thhalv10014387m.g I 0.767
Thhalv10004402m.g Eutrema salsugineum Thhalv10004402m.g I 0.664
Thhalv10002605m.g Eutrema salsugineum Thhalv10002605m.g I 0.849
SapurV1A.1916s0020 Salix purpurea SapurV1A.1916s0020 I 0.806
SapurV1A.0159s0180 Salix purpurea SapurV1A.0159s0180 I 0.806
SapurV1A.0128s0090 Salix purpurea SapurV1A.0128s0090 I 0.849
SapurV1A.0055s0320 Salix purpurea SapurV1A.0055s0320 I 0.665
SapurV1A.0041s0350 Salix purpurea SapurV1A.0041s0350 I 0.831
SapurV1A.0015s0530 Salix purpurea SapurV1A.0015s0530 I 0.665
Pavir.J10623 Panicum virgatum Pavir.J10623 I 0.681
Lus10012102.g Linum usitatissimum Lus10012102.g I 0.767
Lus10010442.g Linum usitatissimum Lus10010442.g I 0.767
Gorai.011G196400 Gossypium raimondii Gorai.011G196400 I 0.672
Eucgr.B02313 Eucalyptus grandis Eucgr.B02313 I 0.849
Eucgr.A02201 Eucalyptus grandis Eucgr.A02201 I 0.767
Eucgr.A00189 Eucalyptus grandis Eucgr.A00189 I 0.672
estExt_fgenesh2_pg.C_Chr_120081 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_120081 I 0.747
Ciclev10028658m.g Citrus clementina Ciclev10028658m.g I 0.849
Ciclev10014527m.g Citrus clementina Ciclev10014527m.g I 0.665
Ciclev10012203m.g Citrus clementina Ciclev10012203m.g I 0.767
Ciclev10004989m.g Citrus clementina Ciclev10004989m.g I 0.672
Ciclev10004470m.g Citrus clementina Ciclev10004470m.g I 0.672
Carubv10026895m.g Capsella rubella Carubv10026895m.g I 0.847
Carubv10024931m.g Capsella rubella Carubv10024931m.g I 0.685
Carubv10024859m.g Capsella rubella Carubv10024859m.g I 0.767
Carubv10018465m.g Capsella rubella Carubv10018465m.g I 0.662
Carubv10017603m.g Capsella rubella Carubv10017603m.g I 0.849
Carubv10014134m.g Capsella rubella Carubv10014134m.g I 0.767
Eucgr.G02094 Eucalyptus grandis Eucgr.G02094 I 0.665
Eucgr.K01670 Eucalyptus grandis Eucgr.K01670 I 0.767
Gorai.009G097100 Gossypium raimondii Gorai.009G097100 I 0.849
Gorai.007G351500 Gossypium raimondii Gorai.007G351500 I 0.767
Gorai.006G259700 Gossypium raimondii Gorai.006G259700 I 0.672
Gorai.005G156900 Gossypium raimondii Gorai.005G156900 I 0.665
Gorai.003G129100 Gossypium raimondii Gorai.003G129100 I 0.849
Gorai.002G230800 Gossypium raimondii Gorai.002G230800 I 0.767
Gorai.002G029200 Gossypium raimondii Gorai.002G029200 I 0.672
Gorai.001G112200 Gossypium raimondii Gorai.001G112200 I 0.849
gene30204-v1.0-hybrid Fragaria vesca gene30204-v1.0-hybrid I 0.849
gene17673-v1.0-hybrid Fragaria vesca gene17673-v1.0-hybrid I 0.767
evm.TU.supercontig_92.70 Carica papaya evm.TU.supercontig_92.70 I 0.767
evm.TU.supercontig_9.105 Carica papaya evm.TU.supercontig_9.105 I 0.672
evm.TU.supercontig_81.106 Carica papaya evm.TU.supercontig_81.106 I 0.849
evm.TU.supercontig_2.186 Carica papaya evm.TU.supercontig_2.186 I 0.665
EuGene.0600010100 Micromonas sp RCC299 EuGene.0600010100 I 0.806
Carubv10003130m.g Capsella rubella Carubv10003130m.g I 0.767
OBART01G45440 Oryza barthii OBART01G45440 I 0.760
GSMUA_Achr1G22230_001 Musa acuminata GSMUA_Achr1G22230_001 I 0.665
GSMUA_Achr11G14170_001 Musa acuminata GSMUA_Achr11G14170_001 I 0.767
GSMUA_Achr10G12590_001 Musa acuminata GSMUA_Achr10G12590_001 I 0.752
GSMUA_Achr10G02420_001 Musa acuminata GSMUA_Achr10G02420_001 I 0.849
GRMZM2G471600 Zea mays GRMZM2G471600 I 0.767
GRMZM2G398055 Zea mays GRMZM2G398055 I 0.767
GRMZM2G126834 Zea mays GRMZM2G126834 I 0.665
GRMZM2G099797 Zea mays GRMZM2G099797 I 0.665
GRMZM2G067702 Zea mays GRMZM2G067702 I 0.841
GLYMA19G30700 Glycine max GLYMA19G30700 I 0.767
GLYMA17G03380 Glycine max GLYMA17G03380 I 0.672
GLYMA15G15520 Glycine max GLYMA15G15520 I 0.666
GLYMA12G06406 Glycine max GLYMA12G06406 I 0.849
GLYMA11G14490 Glycine max GLYMA11G14490 I 0.849
GLYMA09G04470 Glycine max GLYMA09G04470 I 0.708
GSMUA_Achr2G01920_001 Musa acuminata GSMUA_Achr2G01920_001 I 0.767
GSMUA_Achr5G07060_001 Musa acuminata GSMUA_Achr5G07060_001 I 0.849
OBART01G37040 Oryza barthii OBART01G37040 I 0.681
OB03G19140 Oryza brachyantha OB03G19140 I 0.665
MTR_7g089010 Medicago truncatula MTR_7g089010 I 0.767
MTR_4g121020 Medicago truncatula MTR_4g121020 I 0.672
MTR_4g064730 Medicago truncatula MTR_4g064730 I 0.849
MLOC_37446 Hordeum vulgare MLOC_37446 I 0.849
MLOC_24056 Hordeum vulgare MLOC_24056 I 0.767
LPERR05G13030 Leersia perrieri LPERR05G13030 I 0.767
LPERR03G08040 Leersia perrieri LPERR03G08040 I 0.665
LPERR01G39850 Leersia perrieri LPERR01G39850 I 0.760
LPERR01G31830 Leersia perrieri LPERR01G31830 I 0.681
GSMUA_AchrUn_randomG18750_001 Musa acuminata GSMUA_AchrUn_randomG18750_001 I 0.843
GSMUA_Achr8G30850_001 Musa acuminata GSMUA_Achr8G30850_001 I 0.665
GSMUA_Achr8G05880_001 Musa acuminata GSMUA_Achr8G05880_001 I 0.767
GSMUA_Achr5G27500_001 Musa acuminata GSMUA_Achr5G27500_001 I 0.767
GLYMA07G37220 Glycine max GLYMA07G37220 I 0.672
GLYMA03G27890 Glycine max GLYMA03G27890 I 0.767
GLYMA02G21820 Glycine max GLYMA02G21820 I 0.767
Bo4g012890 Brassica oleracea Bo4g012890 I 0.767
Bo3g132770 Brassica oleracea Bo3g132770 I 0.849
Bo3g003150 Brassica oleracea Bo3g003150 I 0.767
Bo1g141480 Brassica oleracea Bo1g141480 I 0.680
Bo1g070860 Brassica oleracea Bo1g070860 I 0.849
BGIOSGA018058 Oryza indica BGIOSGA018058 I 0.767
RR21 Oryza indica BGIOSGA012149 I 0.665
BGIOSGA004786 Oryza indica BGIOSGA004786 I 0.681
BGIOSGA000023 Oryza indica BGIOSGA000023 I 0.760
BOA Arabidopsis thaliana AT5G59570 I 0.849
PCL1 Arabidopsis thaliana AT3G46640 I 0.849
AT3G10760 Arabidopsis thaliana AT3G10760 I 0.767
MYBC1 Arabidopsis thaliana AT2G40970 I 0.767
AMTR_s00176p00045260 Amborella trichopoda AMTR_s00176p00045260 I 0.665
AMTR_s00101p00128190 Amborella trichopoda AMTR_s00101p00128190 I 0.806
Bo5g019990 Brassica oleracea Bo5g019990 I 0.767
Bo5g137150 Brassica oleracea Bo5g137150 I 0.767
fgenesh2_kg.8__1908__AT5G59570.1 Arabidopsis lyrata fgenesh2_kg.8__1908__AT5G59570.1 I 0.849
PCL1 Arabidopsis lyrata fgenesh2_kg.5__1030__AT3G46640.2 I 0.849
F775_32153 Aegilops tauschii F775_32153 I 0.665
CHLREDRAFT_111844 Chlamydomonas reinhardtii CHLREDRAFT_111844 I 0.685
BRADI2G62067 Brachypodium distachyon BRADI2G62067 I 0.849
BRADI2G25380 Brachypodium distachyon BRADI2G25380 I 0.767
BRADI1G69480 Brachypodium distachyon BRADI1G69480 I 0.665
Bra034144 Brassica rapa Bra034144 I 0.767
Bra033809 Brassica rapa Bra033809 I 0.849
Bra029866 Brassica rapa Bra029866 I 0.745
Bra018204 Brassica rapa Bra018204 I 0.849
Bra009087 Brassica rapa Bra009087 I 0.767
Bra005837 Brassica rapa Bra005837 I 0.767
Bra004593 Brassica rapa Bra004593 I 0.767
Bo9g177390 Brassica oleracea Bo9g177390 I 0.767
AMTR_s00012p00251530 Amborella trichopoda AMTR_s00012p00251530 I 0.849
Solyc10g078310.1 Solanum lycopersicum Solyc10g078310.1 I 0.767
Sb03g047330 Sorghum bicolor Sb03g047330 I 0.849
Sb03g039610 Sorghum bicolor Sb03g039610 I 0.681
Sb01g042400 Sorghum bicolor Sb01g042400 I 0.665
PRUPE_ppa026577mg Prunus persica PRUPE_ppa026577mg I 0.767
PRUPE_ppa008837mg Prunus persica PRUPE_ppa008837mg I 0.849
PRUPE_ppa002408mg Prunus persica PRUPE_ppa002408mg I 0.672
POPTR_0016s03240 Populus trichocarpa POPTR_0016s03240 I 0.806
POPTR_0010s11600 Populus trichocarpa POPTR_0010s11600 I 0.665
POPTR_0010s00320 Populus trichocarpa POPTR_0010s00320 I 0.672
POPTR_0009s03990 Populus trichocarpa POPTR_0009s03990 I 0.849
POPTR_0008s22990 Populus trichocarpa POPTR_0008s22990 I 0.672
POPTR_0008s13490 Populus trichocarpa POPTR_0008s13490 I 0.665
POPTR_0006s03340 Populus trichocarpa POPTR_0006s03340 I 0.806
POPTR_0001s25040 Populus trichocarpa POPTR_0001s25040 I 0.742
PGSC0003DMG401025624 Solanum tuberosum PGSC0003DMG401025624 I 0.672
Sb09g020340 Sorghum bicolor Sb09g020340 I 0.763
scaffold_301238.1 Arabidopsis lyrata scaffold_301238.1 I 0.767
Solyc07g005140.2 Solanum lycopersicum Solyc07g005140.2 I 0.672
Solyc06g076350.2 Solanum lycopersicum Solyc06g076350.2 I 0.843
Solyc06g005680.2 Solanum lycopersicum Solyc06g005680.2 I 0.849
Solyc05g054390.2 Solanum lycopersicum Solyc05g054390.2 I 0.672
Solyc04g008050.2 Solanum lycopersicum Solyc04g008050.2 I 0.665
Solyc01g065540.2 Solanum lycopersicum Solyc01g065540.2 I 0.672
Si034517m.g Setaria italica Si034517m.g I 0.665
Si002653m.g Setaria italica Si002653m.g I 0.849
Si002016m.g Setaria italica Si002016m.g I 0.681
SELMODRAFT_450181 Selaginella moellendorffii SELMODRAFT_450181 I 0.672
SELMODRAFT_36646 Selaginella moellendorffii SELMODRAFT_36646 I 0.806
SELMODRAFT_173793 Selaginella moellendorffii SELMODRAFT_173793 I 0.672
scaffold_600469.1 Arabidopsis lyrata scaffold_600469.1 I 0.767
ARR14 Arabidopsis lyrata scaffold_500093.1 I 0.662
MYBC1 Arabidopsis lyrata scaffold_402901.1 I 0.767
PGSC0003DMG400030328 Solanum tuberosum PGSC0003DMG400030328 I 0.843
PGSC0003DMG400029514 Solanum tuberosum PGSC0003DMG400029514 I 0.665
PGSC0003DMG400028100 Solanum tuberosum PGSC0003DMG400028100 I 0.767
OPUNC01G44410 Oryza punctata OPUNC01G44410 I 0.760
OPUNC01G35910 Oryza punctata OPUNC01G35910 I 0.681
ONIVA06G01160 Oryza nivara ONIVA06G01160 I 0.665
ONIVA05G17050 Oryza nivara ONIVA05G17050 I 0.767
ONIVA01G51730 Oryza nivara ONIVA01G51730 I 0.760
ONIVA01G41940 Oryza nivara ONIVA01G41940 I 0.681
OMERI05G06680 Oryza meridionalis OMERI05G06680 I 0.767
OMERI03G08390 Oryza meridionalis OMERI03G08390 I 0.665
OMERI01G42240 Oryza meridionalis OMERI01G42240 I 0.760
OMERI01G34110 Oryza meridionalis OMERI01G34110 I 0.681
OLONG_010516 Oryza longistaminata OLONG_010516 I 0.760
OLONG_002370 Oryza longistaminata OLONG_002370 I 0.665
OGLUM03G09080 Oryza glumaepatula OGLUM03G09080 I 0.665
OGLUM01G49830 Oryza glumaepatula OGLUM01G49830 I 0.760
OGLUM01G41000 Oryza glumaepatula OGLUM01G41000 I 0.681
OPUNC03G08640 Oryza punctata OPUNC03G08640 I 0.665
OPUNC05G14480 Oryza punctata OPUNC05G14480 I 0.767
PGSC0003DMG400023534 Solanum tuberosum PGSC0003DMG400023534 I 0.672
PGSC0003DMG400007174 Solanum tuberosum PGSC0003DMG400007174 I 0.767
PGSC0003DMG400003196 Solanum tuberosum PGSC0003DMG400003196 I 0.672
PGSC0003DMG400002144 Solanum tuberosum PGSC0003DMG400002144 I 0.849
OS05G0412000 Oryza sativa OS05G0412000 I 0.767
RR21 Oryza sativa OS03G0224200 I 0.665
PCL1 Oryza sativa OS01G0971800 I 0.760
OS01G0844900 Oryza sativa OS01G0844900 I 0.681
ORUFI03G09090 Oryza rufipogon ORUFI03G09090 I 0.665
ORUFI01G48960 Oryza rufipogon ORUFI01G48960 I 0.760
ORUFI01G40390 Oryza rufipogon ORUFI01G40390 I 0.681
ORGLA05G0141400 Oryza glaberrima ORGLA05G0141400 I 0.767
ORGLA03G0086800 Oryza glaberrima ORGLA03G0086800 I 0.665
ORGLA01G0392100 Oryza glaberrima ORGLA01G0392100 I 0.760
ORGLA01G0309000 Oryza glaberrima ORGLA01G0309000 I 0.681
OBART03G08950 Oryza barthii OBART03G08950 I 0.665