cassava19434.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava19434.valid.m1 T284050_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G05090
M02305_2.00
Arabidopsis thaliana
NHAGATHCKNN

NNMGDATCTDN
PBM
Weirauch et al.(2014)
pTH7104
0.767 0.915
ARR14
M00873_2.00
Arabidopsis thaliana
NNAGATHCKS

SMGDATCTNN
PBM
Franco-Zorrilla et al.(2014)
ARR14
0.662 0.660
ARR14
M02293_2.00
Arabidopsis thaliana
NAGATHYBNN

NNVRDATCTN
PBM
Weirauch et al.(2014)
pTH7531
0.662 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19434.valid.m1 Myb 154 204

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG018001.1 Alligator sinensis Alligator_sinensis_CCG018001.1 I 0.000
dbp Xenopus tropicalis XB-GENE-5995286 I 0.000
DBP Gorilla gorilla ENSGGOG00000001444 I 0.000
DBP Loxodonta africana ENSLAFG00000013079 I 0.000
DBP Myotis lucifugus ENSMLUG00000025433 I 0.000
DBP Macaca mulatta ENSMMUG00000022160 I 0.000
Dbp Mus musculus ENSMUSG00000059824 D 0.000
DBP Otolemur garnettii ENSOGAG00000034399 I 0.000
DBP Procavia capensis ENSPCAG00000011426 I 0.000
DBP Pan troglodytes ENSPTRG00000011247 I 0.000
Dbp Rattus norvegicus ENSRNOG00000021027 I 0.000
DBP Sus scrofa ENSSSCG00000003148 I 0.000
DBP Tursiops truncatus ENSTTRG00000008191 I 0.000
DBP Homo sapiens ENSG00000105516 D 0.000
DBP Cavia porcellus ENSCPOG00000019616 I 0.000
DBP Callithrix jacchus ENSCJAG00000000360 I 0.000
DBP Anolis carolinensis ENSACAG00000015667 I 0.000
DBP Canis familiaris ENSCAFG00000003928 I 0.000
DBP Dasypus novemcinctus ENSDNOG00000016868 I 0.000
DBP Bos taurus ENSBTAG00000006754 I 0.000
Dbp Dipodomys ordii ENSDORG00000010599 I 0.000
DBP Equus caballus ENSECAG00000014275 I 0.000
dbpa Danio rerio ENSDARG00000063014 I 0.000
ENSAMEG00000014843 Ailuropoda melanoleuca ENSAMEG00000014843 I 0.000
ENSAMXG00000009417 Astyanax mexicanus ENSAMXG00000009417 I 0.000
ENSAMXG00000016053 Astyanax mexicanus ENSAMXG00000016053 I 0.000
ENSBTAP00000008883-D1 Bos grunniens ENSBTAP00000008883-D1 I 0.000
ENSCSAG00000002831 Chlorocebus sabaeus ENSCSAG00000002831 I 0.000
ENSFCAG00000030886 Felis catus ENSFCAG00000030886 I 0.000
ENSGACG00000010676 Gasterosteus aculeatus ENSGACG00000010676 I 0.000
ENSLACG00000006062 Latimeria chalumnae ENSLACG00000006062 I 0.000
ENSMEUG00000000663 Macropus eugenii ENSMEUG00000000663 I 0.000
ENSMICG00000016323 Microcebus murinus ENSMICG00000016323 I 0.000
ENSMPUG00000003854 Mustela putorius furo ENSMPUG00000003854 I 0.000
ENSNLEG00000004551 Nomascus leucogenys ENSNLEG00000004551 I 0.000
ENSOARG00000011967 Ovis aries ENSOARG00000011967 I 0.000
ENSONIG00000007041 Oreochromis niloticus ENSONIG00000007041 I 0.000
ENSONIG00000012778 Oreochromis niloticus ENSONIG00000012778 I 0.000
ENSORLG00000011412 Oryzias latipes ENSORLG00000011412 I 0.000
ENSP00000222122 Macaca fascicularis ENSP00000222122 I 0.000
ENSPANG00000015471 Papio anubis ENSPANG00000015471 I 0.000
ENSPFOG00000007430 Poecilia formosa ENSPFOG00000007430 I 0.000
ENSPFOG00000010189 Poecilia formosa ENSPFOG00000010189 I 0.000
ENSPSIG00000015238 Pelodiscus sinensis ENSPSIG00000015238 I 0.000
ENSSSCG00000024294 Sus scrofa ENSSSCG00000024294 I 0.000
ENSSTOG00000024246 Ictidomys tridecemlineatus ENSSTOG00000024246 I 0.000
ENSTNIG00000004400 Tetraodon nigroviridis ENSTNIG00000004400 I 0.000
ENSTNIG00000008098 Tetraodon nigroviridis ENSTNIG00000008098 I 0.000
ENSTRUG00000003893 Takifugu rubripes ENSTRUG00000003893 I 0.000
ENSTRUG00000007098 Takifugu rubripes ENSTRUG00000007098 I 0.000
ENSXMAG00000012054 Xiphophorus maculatus ENSXMAG00000012054 I 0.000
ENSXMAG00000014158 Xiphophorus maculatus ENSXMAG00000014158 I 0.000
Ogr12886 Ophisaurus gracilis Ogr12886 I 0.000
Pvit_12136 Pogona vitticeps Pvit_12136 I 0.000