cassava19913.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava19913.m1 T284057_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19913.m1 Myb 10 57
cassava19913.m1 Myb 64 108

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
cassava17368.m1 Manihot esculenta cassava17368.m1 N 0.859
LjT36B17.50.nd Lotus japonicus LjT36B17.50.nd N 0.840
Carubv10019483m.g Capsella rubella Carubv10019483m.g N 0.817
Cagra.3527s0008 Capsella grandiflora Cagra.3527s0008 N 0.817
30174.m008784 Ricinus communis 30174.m008784 N 0.817
evm.TU.supercontig_37.96 Carica papaya evm.TU.supercontig_37.96 N 0.817
TCM_005653 Theobroma cacao TCM_005653 N 0.817
MDP0000319634 Malus domestica MDP0000319634 N 0.814
Pm017596 Prunus mume Pm017596 N 0.814
MDP0000237596 Malus domestica MDP0000237596 N 0.814
Cla006831 Citrullus lanatus Cla006831 N 0.807
Bo8g095200 Brassica oleracea Bo8g095200 N 0.804
Bra007536 Brassica rapa Bra007536 N 0.804
Pavir.Fb01900 Panicum virgatum Pavir.Fb01900 N 0.796
Cucsa.121070 Cucumis sativus Cucsa.121070 N 0.794
Bra003413 Brassica rapa Bra003413 N 0.793
DUO1 Arabidopsis thaliana AT3G60460 N 0.793
Ciclev10021345m.g Citrus clementina Ciclev10021345m.g N 0.793
DUO1 Vitis vinifera VIT_15s0021g02040 N 0.793
Bostr.13158s0042 Boechera stricta Bostr.13158s0042 N 0.793
DUO1 Arabidopsis lyrata fgenesh2_kg.5__2511__AT3G60460.1 N 0.793
orange1.1g038795m.g Citrus sinensis orange1.1g038795m.g N 0.793
PRUPE_ppa020326mg Prunus persica PRUPE_ppa020326mg N 0.790
Eucgr.E01581 Eucalyptus grandis Eucgr.E01581 N 0.788
GLYMA03G26830 Glycine max GLYMA03G26830 N 0.787
POPTR_0002s14180 Populus trichocarpa POPTR_0002s14180 N 0.787
gene04800-v1.0-hybrid Fragaria vesca gene04800-v1.0-hybrid N 0.785
SapurV1A.0033s0200 Salix purpurea SapurV1A.0033s0200 N 0.784
Pavir.Gb01130 Panicum virgatum Pavir.Gb01130 N 0.784
Si012032m.g Setaria italica Si012032m.g N 0.784
Bo6g077030 Brassica oleracea Bo6g077030 N 0.784
GLYMA07G14480 Glycine max GLYMA07G14480 N 0.778
Thhalv10006475m.g Eutrema salsugineum Thhalv10006475m.g N 0.777
PGSC0003DMG400025720 Solanum tuberosum PGSC0003DMG400025720 N 0.776
Pavir.J30013 Panicum virgatum Pavir.J30013 N 0.776
mgf019330m Mimulus guttatus mgf019330m N 0.776
Pavir.J35399 Panicum virgatum Pavir.J35399 N 0.776
Traes_2BL_855A1170C Triticum aestivum Traes_2BL_855A1170C N 0.773
Traes_2AL_0A21FB42C Triticum aestivum Traes_2AL_0A21FB42C N 0.773
Gorai.004G165400 Gossypium raimondii Gorai.004G165400 N 0.769
MTR_8g006470 Medicago truncatula MTR_8g006470 N 0.769
gene12261-v1.0-hybrid Fragaria vesca gene12261-v1.0-hybrid N 0.769
OMERI04G17240 Oryza meridionalis OMERI04G17240 N 0.768
ONIVA04G19030 Oryza nivara ONIVA04G19030 N 0.768
OPUNC04G18480 Oryza punctata OPUNC04G18480 N 0.768
OGLUM04G20730 Oryza glumaepatula OGLUM04G20730 N 0.768
OBART04G20790 Oryza barthii OBART04G20790 N 0.768
BGIOSGA016880 Oryza indica BGIOSGA016880 N 0.768
ORUFI04G22380 Oryza rufipogon ORUFI04G22380 N 0.768
OB04G27810 Oryza brachyantha OB04G27810 N 0.768
GRMZM2G105137 Zea mays GRMZM2G105137 N 0.768
ORGLA04G0178400 Oryza glaberrima ORGLA04G0178400 N 0.768
PRUPE_ppa016603mg Prunus persica PRUPE_ppa016603mg N 0.764
Pm019530 Prunus mume Pm019530 N 0.764
SapurV1A.0490s0170 Salix purpurea SapurV1A.0490s0170 N 0.764
Pm031387 Prunus mume Pm031387 N 0.764
MTR_4g029540 Medicago truncatula MTR_4g029540 N 0.762
Solyc01g090530.1 Solanum lycopersicum Solyc01g090530.1 N 0.762
POPTR_0014s05420 Populus trichocarpa POPTR_0014s05420 N 0.757
POPTR_0014s05370 Populus trichocarpa POPTR_0014s05370 N 0.757
Pavir.Fa00479 Panicum virgatum Pavir.Fa00479 N 0.748
Traes_2DL_912473A86 Triticum aestivum Traes_2DL_912473A86 N 0.746
Si015815m.g Setaria italica Si015815m.g N 0.745
BRADI5G17600 Brachypodium distachyon BRADI5G17600 N 0.744
Solyc10g019260.1 Solanum lycopersicum Solyc10g019260.1 N 0.740
Sb06g024510 Sorghum bicolor Sb06g024510 N 0.740
Ca_19557 Cicer arietinum Ca_19557 N 0.739
GRMZM2G311059 Zea mays GRMZM2G311059 N 0.730
Sb07g027160 Sorghum bicolor Sb07g027160 N 0.728
Bostr.13158s0046 Boechera stricta Bostr.13158s0046 N 0.724
Ca_18954 Cicer arietinum Ca_18954 N 0.716
Aquca_081_00025 Aquilegia coerulea Aquca_081_00025 N 0.716
GRMZM2G046443 Zea mays GRMZM2G046443 N 0.711
TCM_014872 Theobroma cacao TCM_014872 N 0.710
Cla010897 Citrullus lanatus Cla010897 N 0.701
Aquca_002_00029 Aquilegia coerulea Aquca_002_00029 N 0.700
GLYMA09G00371 Glycine max GLYMA09G00371 N 0.689
Lus10009780.g Linum usitatissimum Lus10009780.g N 0.686
GLYMA12G37026 Glycine max GLYMA12G37026 N 0.686
AMTR_s00111p00072510 Amborella trichopoda AMTR_s00111p00072510 N 0.678
GSMUA_Achr1G01660_001 Musa acuminata GSMUA_Achr1G01660_001 N 0.677
Cucsa.094180 Cucumis sativus Cucsa.094180 N 0.677
gw1.16.238.1 Physcomitrella patens gw1.16.238.1 N 0.672
gw1.114.172.1 Physcomitrella patens gw1.114.172.1 N 0.672