cassava20168.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava20168.m1 T284058_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava20168.m1 Myb 228 273

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava44568.m1 Manihot esculenta cassava44568.m1 N 0.857
Ciclev10026033m.g Citrus clementina Ciclev10026033m.g N 0.820
orange1.1g037355m.g Citrus sinensis orange1.1g037355m.g N 0.820
TCM_000914 Theobroma cacao TCM_000914 N 0.807
Gorai.007G058000 Gossypium raimondii Gorai.007G058000 N 0.796
Cla014299 Citrullus lanatus Cla014299 N 0.795
VIT_17s0000g03540 Vitis vinifera VIT_17s0000g03540 N 0.788
gene05559-v1.0-hybrid Fragaria vesca gene05559-v1.0-hybrid N 0.761
Gorai.003G035800 Gossypium raimondii Gorai.003G035800 N 0.758
Cucsa.103750 Cucumis sativus Cucsa.103750 N 0.746
Lus10002159.g Linum usitatissimum Lus10002159.g N 0.736
GLYMA01G02380 Glycine max GLYMA01G02380 N 0.720
GLYMA09G33600 Glycine max GLYMA09G33600 N 0.720
28179.m000458 Ricinus communis 28179.m000458 N 0.703
POPTR_0018s04230 Populus trichocarpa POPTR_0018s04230 N 0.694
PK06741.1 Cannabis sativa PK06741.1 N 0.692
Aquca_069_00025 Aquilegia coerulea Aquca_069_00025 N 0.687
Pm002284 Prunus mume Pm002284 N 0.677
PRUPE_ppa003947mg Prunus persica PRUPE_ppa003947mg N 0.677
PGSC0003DMG400000839 Solanum tuberosum PGSC0003DMG400000839 N 0.675
Solyc01g068540.2 Solanum lycopersicum Solyc01g068540.2 N 0.675
AMTR_s00044p00144500 Amborella trichopoda AMTR_s00044p00144500 N 0.665
Lus10039632.g Linum usitatissimum Lus10039632.g N 0.665
Si021654m.g Setaria italica Si021654m.g N 0.664