cassava24109.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava24109.valid.m1 T284096_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava24109.valid.m1 Myb 71 119

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30005.m001261 Ricinus communis 30005.m001261 N 0.868
Bra029658 Brassica rapa Bra029658 N 0.808
Bra040015 Brassica rapa Bra040015 N 0.808
Bra001258 Brassica rapa Bra001258 N 0.808
Bo3g061340 Brassica oleracea Bo3g061340 N 0.808
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.808
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.802
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.802
Bo1g147290 Brassica oleracea Bo1g147290 N 0.793
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.787
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.771
Solyc09g020000.2 Solanum lycopersicum Solyc09g020000.2 N 0.746
TCM_002550 Theobroma cacao TCM_002550 N 0.735
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.732
AT3G07565 Arabidopsis thaliana AT3G07565 N 0.719
Cagra.0133s0101 Capsella grandiflora Cagra.0133s0101 N 0.719
Carubv10014434m.g Capsella rubella Carubv10014434m.g N 0.719
fgenesh2_kg.3__781__AT3G07565.3 Arabidopsis lyrata fgenesh2_kg.3__781__AT3G07565.3 N 0.719
Bostr.22252s0273 Boechera stricta Bostr.22252s0273 N 0.719
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N 0.714
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.710
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.710
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.710
ORGLA04G0144300 Oryza glaberrima ORGLA04G0144300 N 0.710
OBART04G17310 Oryza barthii OBART04G17310 N 0.710
LPERR04G13890 Leersia perrieri LPERR04G13890 N 0.710
F775_32546 Aegilops tauschii F775_32546 N 0.710
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.710
OLONG_009317 Oryza longistaminata OLONG_009317 N 0.710
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.710
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.710
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.710
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.710
mgf025428m Mimulus guttatus mgf025428m N 0.709
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N 0.705
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.699
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.691
GSMUA_Achr9G08210_001 Musa acuminata GSMUA_Achr9G08210_001 N 0.689
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.681
Si010917m.g Setaria italica Si010917m.g N 0.681
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.681
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.681
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.680
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.680
Gorai.011G138900 Gossypium raimondii Gorai.011G138900 N 0.677
Ciclev10021850m.g Citrus clementina Ciclev10021850m.g N 0.673
orange1.1g025458m.g Citrus sinensis orange1.1g025458m.g N 0.673
Cla012999 Citrullus lanatus Cla012999 N 0.668
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.667
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.667