CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava26193.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava26193.m1
T284123_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WER
M11047_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.791
0.849
WER
M11048_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.791
0.849
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH
DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.729
0.839
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava26193.m1
Myb
14
61
KGLWTVEEDRILIDYIRVHGKGKWNRVARVTGLKRCGKSCRLRWMNYL
cassava26193.m1
Myb
67
112
RDNFSEEEDDLIIRLHKLLGNRWSLIAGRVPGRTDNQVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
140 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm024725
Prunus mume
Pm024725
I
0.868
VIT_17s0000g08480
Vitis vinifera
VIT_17s0000g08480
I
0.867
MDP0000650225
Malus domestica
MDP0000650225
I
0.866
MDP0000578193
Malus domestica
MDP0000578193
I
0.849
TCM_012057
Theobroma cacao
TCM_012057
I
0.848
PRUPE_ppa010908mg
Prunus persica
PRUPE_ppa010908mg
I
0.844
SapurV1A.1178s0050
Salix purpurea
SapurV1A.1178s0050
I
0.837
POPTR_0012s08190
Populus trichocarpa
POPTR_0012s08190
I
0.835
Eucgr.B00373
Eucalyptus grandis
Eucgr.B00373
I
0.818
SapurV1A.1404s0020
Salix purpurea
SapurV1A.1404s0020
I
0.816
POPTR_0015s08680
Populus trichocarpa
POPTR_0015s08680
I
0.815
evm.TU.supercontig_124.57
Carica papaya
evm.TU.supercontig_124.57
I
0.800
Eucgr.J02212
Eucalyptus grandis
Eucgr.J02212
I
0.799
gene32181-v1.0-hybrid
Fragaria vesca
gene32181-v1.0-hybrid
I
0.793
Carubv10001990m.g
Capsella rubella
Carubv10001990m.g
I
0.791
Cagra.3166s0078
Capsella grandiflora
Cagra.3166s0078
I
0.791
Bostr.2902s0211
Boechera stricta
Bostr.2902s0211
I
0.791
WER
Arabidopsis lyrata
fgenesh2_kg.6__1454__AT5G14750.1
I
0.791
Bo2g012170
Brassica oleracea
Bo2g012170
I
0.791
Thhalv10014715m.g
Eutrema salsugineum
Thhalv10014715m.g
I
0.791
WER
Arabidopsis thaliana
AT5G14750
D
0.791
Aquca_025_00333
Aquilegia coerulea
Aquca_025_00333
I
0.788
Aquca_002_00170
Aquilegia coerulea
Aquca_002_00170
I
0.786
Gorai.007G001800
Gossypium raimondii
Gorai.007G001800
I
0.784
MDP0000266683
Malus domestica
MDP0000266683
I
0.781
Bo9g165670
Brassica oleracea
Bo9g165670
I
0.774
Bra008740
Brassica rapa
Bra008740
I
0.774
TCM_016886
Theobroma cacao
TCM_016886
I
0.771
Bra025311
Brassica rapa
Bra025311
I
0.766
Bo7g090950
Brassica oleracea
Bo7g090950
I
0.755
Bra023486
Brassica rapa
Bra023486
I
0.754
Bostr.1460s0063
Boechera stricta
Bostr.1460s0063
I
0.753
Thhalv10005428m.g
Eutrema salsugineum
Thhalv10005428m.g
I
0.751
Ciclev10017556m.g
Citrus clementina
Ciclev10017556m.g
I
0.748
Gorai.012G061800
Gossypium raimondii
Gorai.012G061800
I
0.742
MDP0000537324
Malus domestica
MDP0000537324
I
0.741
orange1.1g047269m.g
Citrus sinensis
orange1.1g047269m.g
I
0.739
Ciclev10032713m.g
Citrus clementina
Ciclev10032713m.g
I
0.739
VIT_01s0127g00730
Vitis vinifera
VIT_01s0127g00730
I
0.736
GL1
Arabidopsis thaliana
AT3G27920
I
0.735
GL1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5000559
I
0.735
LjT16O05.150.nd
Lotus japonicus
LjT16O05.150.nd
I
0.734
Bostr.7200s0005
Boechera stricta
Bostr.7200s0005
I
0.729
Carubv10005698m.g
Capsella rubella
Carubv10005698m.g
I
0.729
MYB23
Arabidopsis thaliana
AT5G40330
D
0.729
Bra025589
Brassica rapa
Bra025589
I
0.729
Cagra.3160s0003
Capsella grandiflora
Cagra.3160s0003
I
0.729
VIT_14s0066g01220
Vitis vinifera
VIT_14s0066g01220
I
0.728
cassava27350.m1
Manihot esculenta
cassava27350.m1
I
0.727
POPTR_0015s08700
Populus trichocarpa
POPTR_0015s08700
I
0.726
MDP0000164048
Malus domestica
MDP0000164048
I
0.722
SapurV1A.1178s0040
Salix purpurea
SapurV1A.1178s0040
N
0.719
Cagra.4961s0006
Capsella grandiflora
Cagra.4961s0006
I
0.719
Carubv10018791m.g
Capsella rubella
Carubv10018791m.g
I
0.719
TCM_037377
Theobroma cacao
TCM_037377
I
0.717
TCM_010360
Theobroma cacao
TCM_010360
I
0.715
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.715
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.714
Thhalv10028340m.g
Eutrema salsugineum
Thhalv10028340m.g
I
0.714
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
0.713
Eucgr.I01791
Eucalyptus grandis
Eucgr.I01791
I
0.712
PRUPE_ppa014884mg
Prunus persica
PRUPE_ppa014884mg
I
0.711
Pm006678
Prunus mume
Pm006678
I
0.711
Pm027045
Prunus mume
Pm027045
I
0.707
VIT_04s0008g01820
Vitis vinifera
VIT_04s0008g01820
I
0.706
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
0.706
GLYMA20G32500
Glycine max
GLYMA20G32500
I
0.702
PK16315.1
Cannabis sativa
PK16315.1
I
0.702
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.698
MDP0000199965
Malus domestica
MDP0000199965
I
0.698
Si038905m.g
Setaria italica
Si038905m.g
I
0.695
Bostr.0556s0467
Boechera stricta
Bostr.0556s0467
I
0.695
Eucgr.B03324
Eucalyptus grandis
Eucgr.B03324
N
0.694
Pm013279
Prunus mume
Pm013279
I
0.693
PRUPE_ppa010252mg
Prunus persica
PRUPE_ppa010252mg
I
0.693
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
0.693
VIT_09s0002g01400
Vitis vinifera
VIT_09s0002g01400
I
0.693
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.693
TCM_000535
Theobroma cacao
TCM_000535
I
0.693
Bra039065
Brassica rapa
Bra039065
I
0.692
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
0.691
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.691
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
0.691
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
0.691
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.689
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
0.688
GSMUA_Achr9G16040_001
Musa acuminata
GSMUA_Achr9G16040_001
I
0.687
Eucgr.C00723
Eucalyptus grandis
Eucgr.C00723
I
0.686
Eucgr.C03152
Eucalyptus grandis
Eucgr.C03152
N
0.685
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
0.685
Eucgr.C03153
Eucalyptus grandis
Eucgr.C03153
N
0.685
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.684
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.684
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.683
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.683
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.682
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.682
TCM_004509
Theobroma cacao
TCM_004509
I
0.682
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
0.682
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
0.682
AMTR_s00024p00225650
Amborella trichopoda
AMTR_s00024p00225650
N
0.681
GSMUA_Achr9G27380_001
Musa acuminata
GSMUA_Achr9G27380_001
I
0.679
VIT_11s0016g01300
Vitis vinifera
VIT_11s0016g01300
I
0.679
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.677
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.677
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
0.677
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.676
28226.m000839
Ricinus communis
28226.m000839
I
0.676
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.675
gene15389-v1.0-hybrid
Fragaria vesca
gene15389-v1.0-hybrid
I
0.674
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.674
TCM_037376
Theobroma cacao
TCM_037376
I
0.673
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.673
TCM_037379
Theobroma cacao
TCM_037379
I
0.673
GLYMA10G35061
Glycine max
GLYMA10G35061
I
0.673
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.673
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
0.672
Eucgr.C03555
Eucalyptus grandis
Eucgr.C03555
I
0.672
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.670
TCM_010778
Theobroma cacao
TCM_010778
I
0.670
MDP0000031172
Malus domestica
MDP0000031172
I
0.670
MDP0000210851
Malus domestica
MDP0000210851
I
0.670
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.670
Aquca_076_00099
Aquilegia coerulea
Aquca_076_00099
I
0.670
POPTR_0018s03770
Populus trichocarpa
POPTR_0018s03770
I
0.670
TCM_037559
Theobroma cacao
TCM_037559
I
0.670
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.670
Pm005570
Prunus mume
Pm005570
I
0.670
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.669
Ca_03154
Cicer arietinum
Ca_03154
I
0.668
MDP0000184538
Malus domestica
MDP0000184538
I
0.668
29739.m003784
Ricinus communis
29739.m003784
I
0.667
GSMUA_Achr10G17610_001
Musa acuminata
GSMUA_Achr10G17610_001
I
0.666
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.664
LjT02E24.60.nc
Lotus japonicus
LjT02E24.60.nc
I
0.663
LjT02E24.130.nc
Lotus japonicus
LjT02E24.130.nc
I
0.663
LjT02E24.110.nc
Lotus japonicus
LjT02E24.110.nc
I
0.663
cassava2758.m1
Manihot esculenta
cassava2758.m1
I
0.663
gene15386-v1.0-hybrid
Fragaria vesca
gene15386-v1.0-hybrid
I
0.662
cassava9944.m1
Manihot esculenta
cassava9944.m1
I
0.662