cassava26894.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava26894.m1 T284137_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava26894.m1 Myb 12 51
cassava26894.m1 Myb 57 102

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_007865 Theobroma cacao TCM_007865 I 0.795
Gorai.012G132400 Gossypium raimondii Gorai.012G132400 I 0.787
Gorai.002G016800 Gossypium raimondii Gorai.002G016800 I 0.784
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.781
Lus10039734.g Linum usitatissimum Lus10039734.g I 0.777
Lus10039735.g Linum usitatissimum Lus10039735.g I 0.777
GLYMA12G11340 Glycine max GLYMA12G11340 N 0.772
MDP0000407613 Malus domestica MDP0000407613 N 0.766
MDP0000155426 Malus domestica MDP0000155426 I 0.766
PK24260.1 Cannabis sativa PK24260.1 N 0.765
Pm015302 Prunus mume Pm015302 N 0.762
PRUPE_ppa026553mg Prunus persica PRUPE_ppa026553mg N 0.762
Gorai.005G206800 Gossypium raimondii Gorai.005G206800 N 0.761
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.749
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.749
gene01998-v1.0-hybrid Fragaria vesca gene01998-v1.0-hybrid N 0.741
POPTR_0019s14140 Populus trichocarpa POPTR_0019s14140 N 0.737
Ciclev10016303m.g Citrus clementina Ciclev10016303m.g I 0.736
chr3.LjT47O18.40.nc Lotus japonicus chr3.LjT47O18.40.nc N 0.732
MTR_2g089420 Medicago truncatula MTR_2g089420 N 0.728
GLYMA06G45547 Glycine max GLYMA06G45547 N 0.722
Solyc12g005640.1 Solanum lycopersicum Solyc12g005640.1 N 0.714
PGSC0003DMG400013752 Solanum tuberosum PGSC0003DMG400013752 N 0.714
MTR_0251s0050 Medicago truncatula MTR_0251s0050 N 0.712
orange1.1g024860m.g Citrus sinensis orange1.1g024860m.g I 0.712
Solyc07g054980.1 Solanum lycopersicum Solyc07g054980.1 I 0.710
MTR_0008s0390 Medicago truncatula MTR_0008s0390 N 0.710
chr3.LjT47O18.60.nc Lotus japonicus chr3.LjT47O18.60.nc N 0.708
Ca_22597 Cicer arietinum Ca_22597 N 0.708
Lus10033738.g Linum usitatissimum Lus10033738.g N 0.703
MTR_2g089450 Medicago truncatula MTR_2g089450 N 0.701
SapurV1A.0417s0130 Salix purpurea SapurV1A.0417s0130 I 0.698
Lus10031607.g Linum usitatissimum Lus10031607.g N 0.695
Gorai.010G148300 Gossypium raimondii Gorai.010G148300 N 0.691
GLYMA12G32541 Glycine max GLYMA12G32541 N 0.689
Lus10018547.g Linum usitatissimum Lus10018547.g N 0.687
Solyc07g053230.2 Solanum lycopersicum Solyc07g053230.2 I 0.686
PGSC0003DMG401026177 Solanum tuberosum PGSC0003DMG401026177 I 0.686
Ciclev10017679m.g Citrus clementina Ciclev10017679m.g I 0.685
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.683
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.682
PGSC0003DMG402026177 Solanum tuberosum PGSC0003DMG402026177 I 0.681
29933.m001454 Ricinus communis 29933.m001454 N 0.680
GLYMA12G11330 Glycine max GLYMA12G11330 I 0.679
GLYMA06G45554 Glycine max GLYMA06G45554 I 0.679
Eucgr.A01766 Eucalyptus grandis Eucgr.A01766 I 0.679
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.678
OB0039G10010 Oryza brachyantha OB0039G10010 I 0.678
orange1.1g037956m.g Citrus sinensis orange1.1g037956m.g N 0.677
GLYMA06G45540 Glycine max GLYMA06G45540 N 0.677
Solyc07g053240.2 Solanum lycopersicum Solyc07g053240.2 I 0.676
Lus10011820.g Linum usitatissimum Lus10011820.g I 0.676
evm.TU.supercontig_34.62 Carica papaya evm.TU.supercontig_34.62 N 0.676
ORUFI10G14060 Oryza rufipogon ORUFI10G14060 I 0.674
OS10G0478300 Oryza sativa OS10G0478300 I 0.674
BGIOSGA031688 Oryza indica BGIOSGA031688 I 0.674
GLYMA12G11390 Glycine max GLYMA12G11390 N 0.670
PGSC0003DMG400015087 Solanum tuberosum PGSC0003DMG400015087 N 0.670
Gorai.013G071600 Gossypium raimondii Gorai.013G071600 I 0.670
Gorai.013G072900 Gossypium raimondii Gorai.013G072900 I 0.670
PGSC0003DMG400026176 Solanum tuberosum PGSC0003DMG400026176 N 0.669
MDP0000131822 Malus domestica MDP0000131822 I 0.668
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.668
GLYMA12G11490 Glycine max GLYMA12G11490 N 0.667
GSMUA_Achr5G14600_001 Musa acuminata GSMUA_Achr5G14600_001 I 0.666
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.665
TCM_030020 Theobroma cacao TCM_030020 I 0.664
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.663
GLYMA06G45520 Glycine max GLYMA06G45520 N 0.663
MDP0000289283 Malus domestica MDP0000289283 I 0.663
Pm009880 Prunus mume Pm009880 N 0.662
GLYMA13G37903 Glycine max GLYMA13G37903 I 0.661
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.661
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.661