CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava26894.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava26894.m1
T284137_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava26894.m1
Myb
12
51
RQKLTAYVTRYGCWNWRQLPKYAGLSRCGKSCRLRWMNYL
cassava26894.m1
Myb
57
102
RGNYTGEEEEIILRLHESLGNRWSAIAAQLPGRTDNEIKNYWHTNL
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_007865
Theobroma cacao
TCM_007865
I
0.795
Gorai.012G132400
Gossypium raimondii
Gorai.012G132400
I
0.787
Gorai.002G016800
Gossypium raimondii
Gorai.002G016800
I
0.784
VIT_12s0134g00480
Vitis vinifera
VIT_12s0134g00480
I
0.781
Lus10039734.g
Linum usitatissimum
Lus10039734.g
I
0.777
Lus10039735.g
Linum usitatissimum
Lus10039735.g
I
0.777
GLYMA12G11340
Glycine max
GLYMA12G11340
N
0.772
MDP0000407613
Malus domestica
MDP0000407613
N
0.766
MDP0000155426
Malus domestica
MDP0000155426
I
0.766
PK24260.1
Cannabis sativa
PK24260.1
N
0.765
Pm015302
Prunus mume
Pm015302
N
0.762
PRUPE_ppa026553mg
Prunus persica
PRUPE_ppa026553mg
N
0.762
Gorai.005G206800
Gossypium raimondii
Gorai.005G206800
N
0.761
POPTR_0013s14560
Populus trichocarpa
POPTR_0013s14560
I
0.749
SapurV1A.0048s0160
Salix purpurea
SapurV1A.0048s0160
N
0.749
gene01998-v1.0-hybrid
Fragaria vesca
gene01998-v1.0-hybrid
N
0.741
POPTR_0019s14140
Populus trichocarpa
POPTR_0019s14140
N
0.737
Ciclev10016303m.g
Citrus clementina
Ciclev10016303m.g
I
0.736
chr3.LjT47O18.40.nc
Lotus japonicus
chr3.LjT47O18.40.nc
N
0.732
MTR_2g089420
Medicago truncatula
MTR_2g089420
N
0.728
GLYMA06G45547
Glycine max
GLYMA06G45547
N
0.722
Solyc12g005640.1
Solanum lycopersicum
Solyc12g005640.1
N
0.714
PGSC0003DMG400013752
Solanum tuberosum
PGSC0003DMG400013752
N
0.714
MTR_0251s0050
Medicago truncatula
MTR_0251s0050
N
0.712
orange1.1g024860m.g
Citrus sinensis
orange1.1g024860m.g
I
0.712
Solyc07g054980.1
Solanum lycopersicum
Solyc07g054980.1
I
0.710
MTR_0008s0390
Medicago truncatula
MTR_0008s0390
N
0.710
chr3.LjT47O18.60.nc
Lotus japonicus
chr3.LjT47O18.60.nc
N
0.708
Ca_22597
Cicer arietinum
Ca_22597
N
0.708
Lus10033738.g
Linum usitatissimum
Lus10033738.g
N
0.703
MTR_2g089450
Medicago truncatula
MTR_2g089450
N
0.701
SapurV1A.0417s0130
Salix purpurea
SapurV1A.0417s0130
I
0.698
Lus10031607.g
Linum usitatissimum
Lus10031607.g
N
0.695
Gorai.010G148300
Gossypium raimondii
Gorai.010G148300
N
0.691
GLYMA12G32541
Glycine max
GLYMA12G32541
N
0.689
Lus10018547.g
Linum usitatissimum
Lus10018547.g
N
0.687
Solyc07g053230.2
Solanum lycopersicum
Solyc07g053230.2
I
0.686
PGSC0003DMG401026177
Solanum tuberosum
PGSC0003DMG401026177
I
0.686
Ciclev10017679m.g
Citrus clementina
Ciclev10017679m.g
I
0.685
VIT_12s0134g00490
Vitis vinifera
VIT_12s0134g00490
I
0.683
Lus10042561.g
Linum usitatissimum
Lus10042561.g
I
0.682
PGSC0003DMG402026177
Solanum tuberosum
PGSC0003DMG402026177
I
0.681
29933.m001454
Ricinus communis
29933.m001454
N
0.680
GLYMA12G11330
Glycine max
GLYMA12G11330
I
0.679
GLYMA06G45554
Glycine max
GLYMA06G45554
I
0.679
Eucgr.A01766
Eucalyptus grandis
Eucgr.A01766
I
0.679
Bostr.24513s0107
Boechera stricta
Bostr.24513s0107
I
0.678
OB0039G10010
Oryza brachyantha
OB0039G10010
I
0.678
orange1.1g037956m.g
Citrus sinensis
orange1.1g037956m.g
N
0.677
GLYMA06G45540
Glycine max
GLYMA06G45540
N
0.677
Solyc07g053240.2
Solanum lycopersicum
Solyc07g053240.2
I
0.676
Lus10011820.g
Linum usitatissimum
Lus10011820.g
I
0.676
evm.TU.supercontig_34.62
Carica papaya
evm.TU.supercontig_34.62
N
0.676
ORUFI10G14060
Oryza rufipogon
ORUFI10G14060
I
0.674
OS10G0478300
Oryza sativa
OS10G0478300
I
0.674
BGIOSGA031688
Oryza indica
BGIOSGA031688
I
0.674
GLYMA12G11390
Glycine max
GLYMA12G11390
N
0.670
PGSC0003DMG400015087
Solanum tuberosum
PGSC0003DMG400015087
N
0.670
Gorai.013G071600
Gossypium raimondii
Gorai.013G071600
I
0.670
Gorai.013G072900
Gossypium raimondii
Gorai.013G072900
I
0.670
PGSC0003DMG400026176
Solanum tuberosum
PGSC0003DMG400026176
N
0.669
MDP0000131822
Malus domestica
MDP0000131822
I
0.668
GSMUA_Achr5G03920_001
Musa acuminata
GSMUA_Achr5G03920_001
I
0.668
GLYMA12G11490
Glycine max
GLYMA12G11490
N
0.667
GSMUA_Achr5G14600_001
Musa acuminata
GSMUA_Achr5G14600_001
I
0.666
GSMUA_Achr4G21910_001
Musa acuminata
GSMUA_Achr4G21910_001
I
0.665
TCM_030020
Theobroma cacao
TCM_030020
I
0.664
PDK_20s1320951g001
Phoenix dactylifera
PDK_20s1320951g001
I
0.663
GLYMA06G45520
Glycine max
GLYMA06G45520
N
0.663
MDP0000289283
Malus domestica
MDP0000289283
I
0.663
Pm009880
Prunus mume
Pm009880
N
0.662
GLYMA13G37903
Glycine max
GLYMA13G37903
I
0.661
Eucgr.D00042
Eucalyptus grandis
Eucgr.D00042
I
0.661
Eucgr.D00040
Eucalyptus grandis
Eucgr.D00040
I
0.661