cassava27944.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava27944.m1 T284146_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava27944.m1 Myb 14 63
cassava27944.m1 Myb 69 114

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.844
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.842
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.842
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.835
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.826
Ca_10555 Cicer arietinum Ca_10555 N 0.826
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.819
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.816
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.799
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.799
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.790
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.786
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.786
TCM_018082 Theobroma cacao TCM_018082 N 0.782
MDP0000258046 Malus domestica MDP0000258046 N 0.777
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.773
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.769
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.769
mgf012871m Mimulus guttatus mgf012871m I 0.752
TCM_045715 Theobroma cacao TCM_045715 N 0.751
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.751
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.746
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.746
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.745
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.741
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.741
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.735
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.731
Cla019436 Citrullus lanatus Cla019436 N 0.731
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.731
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.727
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.726
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.723
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.723
Bo7g091360 Brassica oleracea Bo7g091360 N 0.720
Bra025337 Brassica rapa Bra025337 N 0.720
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.720
MYB35 Arabidopsis thaliana AT3G28470 N 0.715
Pm015813 Prunus mume Pm015813 N 0.714
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.714
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.714
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.714
F775_14388 Aegilops tauschii F775_14388 I 0.714
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.710
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.710
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.704
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N 0.703
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.702
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.702
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.702
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.702
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.700
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.684
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.684
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.684
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.684
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.684
OB03G23760 Oryza brachyantha OB03G23760 I 0.684
OBART03G13840 Oryza barthii OBART03G13840 I 0.684
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.684
SapurV1A.0161s0110 Salix purpurea SapurV1A.0161s0110 N 0.683
LPERR03G12200 Leersia perrieri LPERR03G12200 I 0.675
Pm024633 Prunus mume Pm024633 N 0.672
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.672
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.667
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.666
MTR_3g045430 Medicago truncatula MTR_3g045430 N 0.665