cassava34176.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava34176.m1 T284203_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q2TCH0_PETHY
M11072_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PH4_01
0.743 0.817
MYB4
M02303_2.00
Arabidopsis thaliana
YACCWACY

RGTWGGTR
PBM
Weirauch et al.(2014)
pTH7075
0.704 0.785
MYB4
M07115_2.00
Arabidopsis thaliana
NYYACCWAMHWHNDD

HHNDWDKTWGGTRRN
Dap-seq
OMalley et al.(2016)
MYB4_col200_a
0.704 0.785
MYB3
M02288_2.00
Arabidopsis thaliana
NNYACCTACCN

NGGTAGGTRNN
PBM
Weirauch et al.(2014)
pTH7125
0.700 0.785
WER
M11047_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2_01
0.692 0.720
WER
M11048_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WEREWOLF_Q2
0.692 0.720
MYB111
M00882_2.00
Arabidopsis thaliana
NNNAMCDAMY

RKTHGKTNNN
PBM
Franco-Zorrilla et al.(2014)
MYB111
0.684 0.785
GRMZM2G005066
M11056_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$C1_Q2
0.680 0.720
MYB23
M07133_2.00
Arabidopsis thaliana
HCAACWAHHHH

DDDDTWGTTGD
Dap-seq
OMalley et al.(2016)
MYB23_col_a
0.662 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava34176.m1 Myb 14 61
cassava34176.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

688 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
VDBG_04231 Verticillium albo atrum VDBG_04231 I 0.000
MAJ_02033 Metarhizium majus MAJ_02033 I 0.000
MANI_109776 Metarhizium anisopliae MANI_109776 I 0.000
MBR_03784 Metarhizium brunneum MBR_03784 I 0.000
MGU_05842 Metarhizium guizhouense MGU_05842 I 0.000
MYCTH_46530 Myceliophthora thermophila MYCTH_46530 I 0.000
NechaG84694 Fusarium solani NechaG84694 I 0.000
PFICI_09469 Pestalotiopsis fici PFICI_09469 I 0.000
S40285_04243 Stachybotrys chlorohalonata S40285_04243 I 0.000
SAPIO_CDS10442 Scedosporium apiospermum SAPIO_CDS10442 I 0.000
SPBR_07260 Sporothrix brasiliensis SPBR_07260 I 0.000
TRIATDRAFT_145258 Trichoderma atroviride TRIATDRAFT_145258 I 0.000
TRIREDRAFT_54675 Trichoderma reesei TRIREDRAFT_54675 I 0.000
TRIVIDRAFT_114530 Trichoderma virens TRIVIDRAFT_114530 I 0.000
UV8b_2461 Ustilaginoidea virens UV8b_2461 I 0.000
VDBG_04231 Verticillium alfalfae VDBG_04231 I 0.000
VHEMI01254 Torrubiella hemipterigena VHEMI01254 I 0.000
X797_006151 Metarhizium robertsii X797_006151 I 0.000
MAC_00519 Metarhizium acridum MAC_00519 I 0.000
HMPREF1624_06747 Sporothrix schenckii HMPREF1624_06747 I 0.000
ACRE_017350 Acremonium chrysogenum ACRE_017350 I 0.000
BBA_00803 Beauveria bassiana BBA_00803 I 0.000
CFIO01_12739 Colletotrichum fioriniae CFIO01_12739 I 0.000
CGGC5_3697 Colletotrichum gloeosporioides CGGC5_3697 I 0.000
CH063_14002 Colletotrichum higginsianum CH063_14002 I 0.000
CHGG_02523 Chaetomium globosum CHGG_02523 I 0.000
CMQ_4188 Grosmannia clavigera CMQ_4188 I 0.000
Cob_11908 Colletotrichum orbiculare Cob_11908 I 0.000
CPUR_01075 Claviceps purpurea CPUR_01075 I 0.000
CSUB01_04359 Colletotrichum sublineola CSUB01_04359 I 0.000
FFUJ_02685 Fusarium fujikuroi FFUJ_02685 I 0.000
FGRRES_07157 Fusarium graminearum FGRRES_07157 I 0.000
FOXG_01644 Fusarium oxysporum FOXG_01644 I 0.000
FPSE_04121 Fusarium pseudograminearum FPSE_04121 I 0.000
FVEG_08005 Fusarium verticillioides FVEG_08005 I 0.000
GGTG_00579 Gaeumannomyces graminis GGTG_00579 I 0.000
GLRG_03163 Colletotrichum graminicola GLRG_03163 I 0.000
fgenesh1_pg.sca_6_chr9_2_0000157 Nectria haematococca fgenesh1_pg.sca_6_chr9_2_0000157 I 0.000