cassava34206.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava34206.m1 T284204_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.703 0.702
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.703 0.702
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.689 0.702
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.689 0.702
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.677 0.723
PHL7
M02292_2.00 		Arabidopsis thaliana
NWGATDCBNN
NNVGHATCWN		 PBM
Weirauch et al.(2014)
pTH7253 		0.674 0.745
PK10342.1
M02351_2.00 		Cannabis sativa
WAGATKCS
SGMATCTW		 PBM
Weirauch et al.(2014)
pTH9489 		0.674 0.745
PHL7
M07040_2.00 		Arabidopsis thaliana
DRNAKATTCBNHNNN
NNNDNVGAATMTNYH		 Dap-seq
OMalley et al.(2016)
At2g01060_colamp_a 		0.674 0.745
PHL7
M07041_2.00 		Arabidopsis thaliana
VGAATATTCBNHH
DDNVGAATATTCB		 Dap-seq
OMalley et al.(2016)
At2g01060_col 		0.674 0.745
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava34206.m1 Myb 246 297

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10040583.g Linum usitatissimum Lus10040583.g I 0.841
POPTR_0018s14830 Populus trichocarpa POPTR_0018s14830 I 0.841
Lus10040569.g Linum usitatissimum Lus10040569.g I 0.841
Lus10028102.g Linum usitatissimum Lus10028102.g I 0.835
Gorai.004G023100 Gossypium raimondii Gorai.004G023100 I 0.768
POPTR_0014s00280 Populus trichocarpa POPTR_0014s00280 I 0.738
AMTR_s00131p00063460 Amborella trichopoda AMTR_s00131p00063460 I 0.734
VIT_09s0070g00410 Vitis vinifera VIT_09s0070g00410 I 0.730
TCM_039819 Theobroma cacao TCM_039819 I 0.728
BRADI3G55120 Brachypodium distachyon BRADI3G55120 I 0.728
GRMZM2G010920 Zea mays GRMZM2G010920 I 0.723
Thhalv10020738m.g Eutrema salsugineum Thhalv10020738m.g I 0.720
orange1.1g011006m.g Citrus sinensis orange1.1g011006m.g I 0.713
Ciclev10030185m.g Citrus clementina Ciclev10030185m.g I 0.713
evm.TU.supercontig_10.14 Carica papaya evm.TU.supercontig_10.14 I 0.713
Gorai.009G120900 Gossypium raimondii Gorai.009G120900 I 0.713
Gorai.011G001500 Gossypium raimondii Gorai.011G001500 I 0.713
TCM_027630 Theobroma cacao TCM_027630 I 0.713
OGLUM06G21780 Oryza glumaepatula OGLUM06G21780 I 0.710
OGLUM08G12610 Oryza glumaepatula OGLUM08G12610 I 0.710
OLONG_023378 Oryza longistaminata OLONG_023378 I 0.710
OLONG_021348 Oryza longistaminata OLONG_021348 I 0.710
OBART06G20690 Oryza barthii OBART06G20690 I 0.710
LPERR06G17280 Leersia perrieri LPERR06G17280 I 0.710
LPERR08G09750 Leersia perrieri LPERR08G09750 I 0.710
OB06G28540 Oryza brachyantha OB06G28540 I 0.710
OB08G20230 Oryza brachyantha OB08G20230 I 0.710
OMERI06G21260 Oryza meridionalis OMERI06G21260 I 0.710
OBART08G11790 Oryza barthii OBART08G11790 I 0.710
ORUFI08G13040 Oryza rufipogon ORUFI08G13040 I 0.710
OS06G0609500 Oryza sativa OS06G0609500 I 0.710
GSMUA_Achr3G11970_001 Musa acuminata GSMUA_Achr3G11970_001 I 0.710
SELMODRAFT_47417 Selaginella moellendorffii SELMODRAFT_47417 I 0.710
SELMODRAFT_57477 Selaginella moellendorffii SELMODRAFT_57477 I 0.710
Si014152m.g Setaria italica Si014152m.g I 0.710
ORUFI06G22120 Oryza rufipogon ORUFI06G22120 I 0.710
ORGLA08G0104600 Oryza glaberrima ORGLA08G0104600 I 0.710
ONIVA09G02590 Oryza nivara ONIVA09G02590 I 0.710
OPUNC06G18860 Oryza punctata OPUNC06G18860 I 0.710
OPUNC08G10740 Oryza punctata OPUNC08G10740 I 0.710
ORGLA06G0171400 Oryza glaberrima ORGLA06G0171400 I 0.710
ONIVA06G24430 Oryza nivara ONIVA06G24430 I 0.710
OS08G0346500 Oryza sativa OS08G0346500 I 0.710
BGIOSGA023251 Oryza indica BGIOSGA023251 I 0.710
BRADI3G22290 Brachypodium distachyon BRADI3G22290 I 0.710
BGIOSGA028511 Oryza indica BGIOSGA028511 I 0.710
Aquca_009_00105 Aquilegia coerulea Aquca_009_00105 I 0.705
Lus10037296.g Linum usitatissimum Lus10037296.g I 0.704
Gorai.007G274700 Gossypium raimondii Gorai.007G274700 I 0.704
VIT_09s0054g01620 Vitis vinifera VIT_09s0054g01620 I 0.704
PHL6 Arabidopsis thaliana AT3G13040 D 0.703
Carubv10013614m.g Capsella rubella Carubv10013614m.g I 0.700
Cagra.8766s0002 Capsella grandiflora Cagra.8766s0002 I 0.700
SapurV1A.0703s0050 Salix purpurea SapurV1A.0703s0050 I 0.698
Lus10008197.g Linum usitatissimum Lus10008197.g I 0.698
AMTR_s00025p00224230 Amborella trichopoda AMTR_s00025p00224230 I 0.698
Cla003565 Citrullus lanatus Cla003565 I 0.698
GSMUA_Achr10G23260_001 Musa acuminata GSMUA_Achr10G23260_001 I 0.698
SapurV1A.0307s0080 Salix purpurea SapurV1A.0307s0080 I 0.698
Lus10035705.g Linum usitatissimum Lus10035705.g I 0.698
POPTR_0007s15110 Populus trichocarpa POPTR_0007s15110 I 0.698
POPTR_0013s04530 Populus trichocarpa POPTR_0013s04530 I 0.698
POPTR_0019s03750 Populus trichocarpa POPTR_0019s03750 I 0.698
MDP0000142146 Malus domestica MDP0000142146 I 0.698
MDP0000182154 Malus domestica MDP0000182154 I 0.698
PRUPE_ppa005159mg Prunus persica PRUPE_ppa005159mg I 0.698
gene05518-v1.0-hybrid Fragaria vesca gene05518-v1.0-hybrid I 0.698
GSMUA_Achr7G15740_001 Musa acuminata GSMUA_Achr7G15740_001 I 0.698
cassava35980.valid.m1 Manihot esculenta cassava35980.valid.m1 I 0.698
cassava39270.m1 Manihot esculenta cassava39270.m1 I 0.698
cassava35979.valid.m1 Manihot esculenta cassava35979.valid.m1 I 0.698
MTR_7g115530 Medicago truncatula MTR_7g115530 I 0.698
cassava22661.valid.m1 Manihot esculenta cassava22661.valid.m1 I 0.698
PDK_20s1523411g004 Phoenix dactylifera PDK_20s1523411g004 I 0.698
Cucsa.027530 Cucumis sativus Cucsa.027530 I 0.698
cassava44101.valid.m1 Manihot esculenta cassava44101.valid.m1 I 0.698
Eucgr.F04055 Eucalyptus grandis Eucgr.F04055 I 0.698
29680.m001711 Ricinus communis 29680.m001711 I 0.698
Pm013132 Prunus mume Pm013132 I 0.698
mgf020931m Mimulus guttatus mgf020931m I 0.694
VIT_14s0036g01380 Vitis vinifera VIT_14s0036g01380 I 0.693
BGIOSGA030474 Oryza indica BGIOSGA030474 I 0.692
estExt_fgenesh1_pg.C_2690029 Physcomitrella patens estExt_fgenesh1_pg.C_2690029 I 0.692
estExt_fgenesh1_pg.C_2260017 Physcomitrella patens estExt_fgenesh1_pg.C_2260017 I 0.692
GSMUA_Achr3G28410_001 Musa acuminata GSMUA_Achr3G28410_001 I 0.692
Sb02g020700 Sorghum bicolor Sb02g020700 I 0.692
Lus10004809.g Linum usitatissimum Lus10004809.g I 0.692
Gorai.010G247100 Gossypium raimondii Gorai.010G247100 I 0.692
29701.m000580 Ricinus communis 29701.m000580 I 0.692
TRIUR3_29870 Triticum urartu TRIUR3_29870 I 0.692
POPTR_0016s12430 Populus trichocarpa POPTR_0016s12430 I 0.692
PDK_20s1369041g001 Phoenix dactylifera PDK_20s1369041g001 I 0.692
Traes_5DL_EB47672ED Triticum aestivum Traes_5DL_EB47672ED I 0.692
Traes_5BL_A2C97A02D Triticum aestivum Traes_5BL_A2C97A02D I 0.692
Si030592m.g Setaria italica Si030592m.g I 0.692
Lus10005036.g Linum usitatissimum Lus10005036.g I 0.692
TCM_021688 Theobroma cacao TCM_021688 I 0.692
Traes_5AL_6F77CFB03 Triticum aestivum Traes_5AL_6F77CFB03 I 0.692
Eucgr.D00972 Eucalyptus grandis Eucgr.D00972 I 0.692
Lus10027806.g Linum usitatissimum Lus10027806.g I 0.692
Pavir.Ba02820 Panicum virgatum Pavir.Ba02820 I 0.692
F775_09661 Aegilops tauschii F775_09661 I 0.692
ORUFI09G05110 Oryza rufipogon ORUFI09G05110 I 0.692
OPUNC09G03970 Oryza punctata OPUNC09G03970 I 0.692
ORGLA09G0034900 Oryza glaberrima ORGLA09G0034900 I 0.692
ONIVA09G04730 Oryza nivara ONIVA09G04730 I 0.692
GRMZM2G173943 Zea mays GRMZM2G173943 I 0.692
BRADI4G27620 Brachypodium distachyon BRADI4G27620 I 0.692
OB09G12870 Oryza brachyantha OB09G12870 I 0.692
Pavir.Bb01632 Panicum virgatum Pavir.Bb01632 I 0.692
MLOC_60074 Hordeum vulgare MLOC_60074 I 0.692
POPTR_0006s10190 Populus trichocarpa POPTR_0006s10190 I 0.692
GSMUA_Achr4G11370_001 Musa acuminata GSMUA_Achr4G11370_001 I 0.692
OGLUM09G05280 Oryza glumaepatula OGLUM09G05280 I 0.692
OS09G0299200 Oryza sativa OS09G0299200 I 0.692
LPERR09G03210 Leersia perrieri LPERR09G03210 I 0.692
OBART09G04530 Oryza barthii OBART09G04530 I 0.692
GSMUA_Achr7G06180_001 Musa acuminata GSMUA_Achr7G06180_001 I 0.690
PHL1 Arabidopsis lyrata fgenesh2_kg.6__2806__AT5G29000.2 I 0.689
PHL1 Arabidopsis thaliana AT5G29000 D 0.689
Thhalv10004351m.g Eutrema salsugineum Thhalv10004351m.g I 0.689
Bostr.23151s0001 Boechera stricta Bostr.23151s0001 I 0.689
AMTR_s00026p00153500 Amborella trichopoda AMTR_s00026p00153500 I 0.688
Bra038033 Brassica rapa Bra038033 I 0.688
SapurV1A.0309s0130 Salix purpurea SapurV1A.0309s0130 I 0.687
Eucgr.B02155 Eucalyptus grandis Eucgr.B02155 I 0.687
Solyc04g050070.1 Solanum lycopersicum Solyc04g050070.1 I 0.687
orange1.1g014308m.g Citrus sinensis orange1.1g014308m.g I 0.687
Ciclev10004984m.g Citrus clementina Ciclev10004984m.g I 0.687
GSMUA_Achr2G10180_001 Musa acuminata GSMUA_Achr2G10180_001 I 0.685
Gorai.006G182800 Gossypium raimondii Gorai.006G182800 I 0.685
chr1.LjB18K24.110.nd Lotus japonicus chr1.LjB18K24.110.nd I 0.683
GLYMA18G43130 Glycine max GLYMA18G43130 I 0.683
Lus10002483.g Linum usitatissimum Lus10002483.g I 0.681
Sb10g029200 Sorghum bicolor Sb10g029200 I 0.680
Traes_7DL_999E12D5D Triticum aestivum Traes_7DL_999E12D5D I 0.680
Traes_7AL_A33076690 Triticum aestivum Traes_7AL_A33076690 I 0.680
TRIUR3_18000 Triticum urartu TRIUR3_18000 I 0.680
Traes_7BL_F20FD5D20 Triticum aestivum Traes_7BL_F20FD5D20 I 0.680
F775_07476 Aegilops tauschii F775_07476 I 0.680
Aquca_004_00369 Aquilegia coerulea Aquca_004_00369 I 0.679
fgenesh2_kg.3__1373__AT3G13040.1 Arabidopsis lyrata fgenesh2_kg.3__1373__AT3G13040.1 I 0.679
Bo2g151830 Brassica oleracea Bo2g151830 I 0.677
30169.m006598 Ricinus communis 30169.m006598 I 0.677
Bostr.7867s0704 Boechera stricta Bostr.7867s0704 I 0.677
Cagra.1225s0029 Capsella grandiflora Cagra.1225s0029 I 0.677
Bra039364 Brassica rapa Bra039364 I 0.677
Carubv10001064m.g Capsella rubella Carubv10001064m.g I 0.677
Thhalv10025330m.g Eutrema salsugineum Thhalv10025330m.g I 0.677
Solyc05g055940.2 Solanum lycopersicum Solyc05g055940.2 I 0.677
Cucsa.037070 Cucumis sativus Cucsa.037070 I 0.677
Bra020622 Brassica rapa Bra020622 I 0.677
GSMUA_Achr4G30200_001 Musa acuminata GSMUA_Achr4G30200_001 I 0.677
fgenesh1_pm.C_scaffold_3000324 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000324 I 0.677
Bra001484 Brassica rapa Bra001484 I 0.677
VIT_08s0105g00370 Vitis vinifera VIT_08s0105g00370 I 0.677
Cla006047 Citrullus lanatus Cla006047 I 0.677
PHR1 Arabidopsis lyrata fgenesh2_kg.7__1335__AT4G28610.1 I 0.677
PHR1 Arabidopsis thaliana AT4G28610 D 0.677
PGSC0003DMG400023467 Solanum tuberosum PGSC0003DMG400023467 I 0.677
Bo3g065290 Brassica oleracea Bo3g065290 I 0.677
Bo1g138650 Brassica oleracea Bo1g138650 I 0.677
MDP0000323119 Malus domestica MDP0000323119 I 0.674
Pavir.J14911 Panicum virgatum Pavir.J14911 I 0.674
Cagra.2315s0003 Capsella grandiflora Cagra.2315s0003 I 0.674
Bostr.7903s0063 Boechera stricta Bostr.7903s0063 I 0.674
Pavir.Db00228 Panicum virgatum Pavir.Db00228 I 0.674
Carubv10017769m.g Capsella rubella Carubv10017769m.g I 0.674
PK10342.1 Cannabis sativa PK10342.1 D 0.674
SapurV1A.0089s0170 Salix purpurea SapurV1A.0089s0170 I 0.674
Thhalv10000981m.g Eutrema salsugineum Thhalv10000981m.g I 0.674
SapurV1A.0220s0460 Salix purpurea SapurV1A.0220s0460 I 0.674
evm.TU.supercontig_27.185 Carica papaya evm.TU.supercontig_27.185 I 0.674
gene19867-v1.0-hybrid Fragaria vesca gene19867-v1.0-hybrid I 0.674
Pavir.J27649 Panicum virgatum Pavir.J27649 I 0.674
Eucgr.E04232 Eucalyptus grandis Eucgr.E04232 I 0.674
Ciclev10015893m.g Citrus clementina Ciclev10015893m.g I 0.674
MDP0000826899 Malus domestica MDP0000826899 I 0.674
Pavir.Aa03223 Panicum virgatum Pavir.Aa03223 I 0.674
orange1.1g025728m.g Citrus sinensis orange1.1g025728m.g I 0.674
orange1.1g020124m.g Citrus sinensis orange1.1g020124m.g I 0.674
Ciclev10013453m.g Citrus clementina Ciclev10013453m.g I 0.674
Traes_7BL_09DD5A1DC Triticum aestivum Traes_7BL_09DD5A1DC I 0.674
POPTR_0016s00310 Populus trichocarpa POPTR_0016s00310 I 0.674
PRUPE_ppa009121mg Prunus persica PRUPE_ppa009121mg I 0.674
POPTR_0006s00290 Populus trichocarpa POPTR_0006s00290 I 0.674
PGSC0003DMG400008786 Solanum tuberosum PGSC0003DMG400008786 I 0.674
OS06G0703900 Oryza sativa OS06G0703900 I 0.674
PGSC0003DMG400007401 Solanum tuberosum PGSC0003DMG400007401 I 0.674
Si006354m.g Setaria italica Si006354m.g I 0.674
Solyc11g022470.1 Solanum lycopersicum Solyc11g022470.1 I 0.674
Traes_7DL_090D0E08E Triticum aestivum Traes_7DL_090D0E08E I 0.674
TRIUR3_32904 Triticum urartu TRIUR3_32904 I 0.674
Traes_7AL_D45376F32 Triticum aestivum Traes_7AL_D45376F32 I 0.674
TCM_030480 Theobroma cacao TCM_030480 I 0.674
Solyc11g067280.1 Solanum lycopersicum Solyc11g067280.1 I 0.674
ORGLA06G0222600 Oryza glaberrima ORGLA06G0222600 I 0.674
OB06G34350 Oryza brachyantha OB06G34350 I 0.674
Bra024909 Brassica rapa Bra024909 I 0.674
BRADI1G34470 Brachypodium distachyon BRADI1G34470 I 0.674
Bo7g077990 Brassica oleracea Bo7g077990 I 0.674
BGIOSGA023563 Oryza indica BGIOSGA023563 I 0.674
AMTR_s00061p00095620 Amborella trichopoda AMTR_s00061p00095620 I 0.674
PHL7 Arabidopsis thaliana AT2G01060 D 0.674
F775_29452 Aegilops tauschii F775_29452 I 0.674
fgenesh2_kg.5__3__AT2G01060.1 Arabidopsis lyrata fgenesh2_kg.5__3__AT2G01060.1 I 0.674
MTR_2g027860 Medicago truncatula MTR_2g027860 I 0.674
MTR_7g068600 Medicago truncatula MTR_7g068600 N 0.674
MLOC_54829 Hordeum vulgare MLOC_54829 I 0.674
GLYMA15G12940 Glycine max GLYMA15G12940 I 0.674
GLYMA09G02040 Glycine max GLYMA09G02040 I 0.674
VIT_00s0475g00040 Vitis vinifera VIT_00s0475g00040 I 0.674
Si017191m.g Setaria italica Si017191m.g I 0.674
Cucsa.044390 Cucumis sativus Cucsa.044390 I 0.674
mgf002744m Mimulus guttatus mgf002744m I 0.674
cassava36260.valid.m1 Manihot esculenta cassava36260.valid.m1 I 0.674
cassava13407.valid.m1 Manihot esculenta cassava13407.valid.m1 I 0.674
cassava13406.valid.m1 Manihot esculenta cassava13406.valid.m1 I 0.674
mgf003647m Mimulus guttatus mgf003647m I 0.674
mgf006394m Mimulus guttatus mgf006394m I 0.674
mgf015945m Mimulus guttatus mgf015945m I 0.674
mgf014369m Mimulus guttatus mgf014369m I 0.674
mgf012689m Mimulus guttatus mgf012689m I 0.674
mgf007291m Mimulus guttatus mgf007291m I 0.674
29805.m001544 Ricinus communis 29805.m001544 I 0.674
cassava36261.valid.m1 Manihot esculenta cassava36261.valid.m1 I 0.674
Pm009657 Prunus mume Pm009657 I 0.674
Ca_07939 Cicer arietinum Ca_07939 I 0.674
Cla014593 Citrullus lanatus Cla014593 I 0.674
gene18340-v1.0-hybrid Fragaria vesca gene18340-v1.0-hybrid I 0.672
MDP0000773970 Malus domestica MDP0000773970 I 0.672
LPERR02G03030 Leersia perrieri LPERR02G03030 I 0.672
MDP0000241055 Malus domestica MDP0000241055 I 0.672
PRUPE_ppa023008mg Prunus persica PRUPE_ppa023008mg I 0.672
Bostr.3640s0078 Boechera stricta Bostr.3640s0078 I 0.671
Carubv10013698m.g Capsella rubella Carubv10013698m.g I 0.671
Cagra.5641s0065 Capsella grandiflora Cagra.5641s0065 I 0.671
Sb04g003140 Sorghum bicolor Sb04g003140 I 0.671
PRUPE_ppa009512mg Prunus persica PRUPE_ppa009512mg I 0.670
GLYMA03G00590 Glycine max GLYMA03G00590 I 0.670
chr1.CM0098.390.nd Lotus japonicus chr1.CM0098.390.nd I 0.670
Pm025479 Prunus mume Pm025479 I 0.670
AMTR_s00095p00071020 Amborella trichopoda AMTR_s00095p00071020 I 0.670
gene27918-v1.0-hybrid Fragaria vesca gene27918-v1.0-hybrid I 0.670
Ca_08144 Cicer arietinum Ca_08144 I 0.670
evm.TU.supercontig_33.181 Carica papaya evm.TU.supercontig_33.181 I 0.670
Cla017754 Citrullus lanatus Cla017754 I 0.670
GLYMA19G30220 Glycine max GLYMA19G30220 I 0.670
Cucsa.337130 Cucumis sativus Cucsa.337130 I 0.670
MTR_7g088070 Medicago truncatula MTR_7g088070 I 0.670
MTR_1g090670 Medicago truncatula MTR_1g090670 I 0.670
MDP0000323121 Malus domestica MDP0000323121 I 0.670
MDP0000232923 Malus domestica MDP0000232923 I 0.670
VIT_08s0040g00100 Vitis vinifera VIT_08s0040g00100 I 0.670
Bo5g148190 Brassica oleracea Bo5g148190 I 0.667
Cagra.4031s0031 Capsella grandiflora Cagra.4031s0031 I 0.667
Carubv10002022m.g Capsella rubella Carubv10002022m.g I 0.667
Thhalv10020942m.g Eutrema salsugineum Thhalv10020942m.g I 0.667
Carubv10013867m.g Capsella rubella Carubv10013867m.g I 0.667
Bra040196 Brassica rapa Bra040196 I 0.667
evm.TU.contig_34762 Carica papaya evm.TU.contig_34762 I 0.661