cassava3467.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava3467.m1 T284208_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava3467.m1 Myb 14 61
cassava3467.m1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava41021.m1 Manihot esculenta cassava41021.m1 I 0.794
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.742
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.730
TCM_037559 Theobroma cacao TCM_037559 I 0.725
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.725
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.720
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.720
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.716
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.715
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.709
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.709
TCM_004509 Theobroma cacao TCM_004509 I 0.709
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.709
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.708
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.707
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.707
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.707
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.706
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.706
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.705
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.705
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.705
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.705
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.704
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.704
gene15383-v1.0-hybrid Fragaria vesca gene15383-v1.0-hybrid N 0.704
Pm005572 Prunus mume Pm005572 I 0.704
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.703
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.702
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.701
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.700
TCM_037376 Theobroma cacao TCM_037376 I 0.700
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.700
Ca_03154 Cicer arietinum Ca_03154 I 0.700
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.700
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.700
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.700
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.700
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.700
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.700
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.700
MDP0000031172 Malus domestica MDP0000031172 I 0.700
Pm005570 Prunus mume Pm005570 I 0.700
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.700
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.699
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.698
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.698
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.698
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.697
MDP0000210851 Malus domestica MDP0000210851 I 0.697
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.697
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.697
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.697
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.695
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.695
TCM_037377 Theobroma cacao TCM_037377 I 0.695
MDP0000318013 Malus domestica MDP0000318013 I 0.693
28226.m000839 Ricinus communis 28226.m000839 I 0.692
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.691
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.689
GSMUA_Achr10G17610_001 Musa acuminata GSMUA_Achr10G17610_001 I 0.689
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.689
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.689
MDP0000437717 Malus domestica MDP0000437717 I 0.689
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.689
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.689
Pm029489 Prunus mume Pm029489 I 0.688
Pm027047 Prunus mume Pm027047 I 0.687
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.687
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.687
Pm013279 Prunus mume Pm013279 I 0.686
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.685
Pm005571 Prunus mume Pm005571 I 0.685
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.685
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.683
Si038905m.g Setaria italica Si038905m.g I 0.683
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.683
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.683
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.682
SapurV1A.0930s0010 Salix purpurea SapurV1A.0930s0010 I 0.682
SapurV1A.3493s0010 Salix purpurea SapurV1A.3493s0010 I 0.681
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.681
SapurV1A.1968s0080 Salix purpurea SapurV1A.1968s0080 I 0.681
TCM_010778 Theobroma cacao TCM_010778 I 0.680
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.680
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.680
TCM_037379 Theobroma cacao TCM_037379 I 0.679
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.679
Ca_12762 Cicer arietinum Ca_12762 N 0.678
MDP0000184538 Malus domestica MDP0000184538 I 0.677
GSMUA_Achr9G27380_001 Musa acuminata GSMUA_Achr9G27380_001 I 0.677
PK16315.1 Cannabis sativa PK16315.1 I 0.677
TCM_037383 Theobroma cacao TCM_037383 I 0.677
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.676
PDK_20s13009436g002 Phoenix dactylifera PDK_20s13009436g002 I 0.676
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.675
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.675
TCM_000535 Theobroma cacao TCM_000535 I 0.675
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.675
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.675
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.673
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.673
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.673
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.673
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.672
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.671
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.671
OB03G30160 Oryza brachyantha OB03G30160 I 0.671
OB06G16110 Oryza brachyantha OB06G16110 I 0.671
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.671
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.670
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.670
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.670
TT2 Arabidopsis thaliana AT5G35550 I 0.670
Bo8g030520 Brassica oleracea Bo8g030520 I 0.670
Bra035532 Brassica rapa Bra035532 I 0.670
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.670
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.669
gene25685-v1.0-hybrid Fragaria vesca gene25685-v1.0-hybrid I 0.669
orange1.1g036591m.g Citrus sinensis orange1.1g036591m.g I 0.668
Ciclev10026498m.g Citrus clementina Ciclev10026498m.g I 0.668
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.667
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.666
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.666
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.666
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.665
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.664
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.663
GSMUA_Achr4G21700_001 Musa acuminata GSMUA_Achr4G21700_001 I 0.662
Pm005577 Prunus mume Pm005577 I 0.661
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.661
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.661
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.661
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.661
29739.m003784 Ricinus communis 29739.m003784 I 0.661