CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava35798.valid.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava35798.valid.m1
T284223_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava35798.valid.m1
Myb
4
53
RQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYL
cassava35798.valid.m1
Myb
59
104
KGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFK
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm002699
Prunus mume
Pm002699
N
0.909
29767.m000199
Ricinus communis
29767.m000199
N
0.909
28603.m000172
Ricinus communis
28603.m000172
N
0.909
PRUPE_ppa007753mg
Prunus persica
PRUPE_ppa007753mg
N
0.909
GLYMA03G19030
Glycine max
GLYMA03G19030
N
0.909
GLYMA18G26600
Glycine max
GLYMA18G26600
N
0.906
MDP0000708334
Malus domestica
MDP0000708334
N
0.903
Aquca_027_00369
Aquilegia coerulea
Aquca_027_00369
N
0.903
VIT_08s0007g00410
Vitis vinifera
VIT_08s0007g00410
N
0.903
evm.TU.supercontig_333.1
Carica papaya
evm.TU.supercontig_333.1
N
0.902
SapurV1A.0001s1780
Salix purpurea
SapurV1A.0001s1780
N
0.900
MDP0000282792
Malus domestica
MDP0000282792
N
0.900
POPTR_0006s08610
Populus trichocarpa
POPTR_0006s08610
N
0.900
Eucgr.K03130
Eucalyptus grandis
Eucgr.K03130
N
0.897
Lus10024392.g
Linum usitatissimum
Lus10024392.g
N
0.896
Solyc09g010840.1
Solanum lycopersicum
Solyc09g010840.1
N
0.895
PGSC0003DMG400008834
Solanum tuberosum
PGSC0003DMG400008834
N
0.895
TCM_021932
Theobroma cacao
TCM_021932
N
0.894
Gorai.012G104100
Gossypium raimondii
Gorai.012G104100
N
0.890
Thhalv10016830m.g
Eutrema salsugineum
Thhalv10016830m.g
N
0.881
scaffold_402408.1
Arabidopsis lyrata
scaffold_402408.1
N
0.881
Cagra.18121s0004
Capsella grandiflora
Cagra.18121s0004
N
0.881
Bo4g030340
Brassica oleracea
Bo4g030340
N
0.881
Bo3g031880
Brassica oleracea
Bo3g031880
N
0.881
AS1
Arabidopsis thaliana
AT2G37630
N
0.881
Bra000011
Brassica rapa
Bra000011
N
0.881
Bra005177
Brassica rapa
Bra005177
N
0.881
Bostr.23794s0314
Boechera stricta
Bostr.23794s0314
N
0.881
fgenesh1_pm.C_scaffold_4001520
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_4001520
N
0.881
Carubv10023471m.g
Capsella rubella
Carubv10023471m.g
N
0.877
chr3.LjT11G09.150.nc
Lotus japonicus
chr3.LjT11G09.150.nc
N
0.876
gene18421-v1.0-hybrid
Fragaria vesca
gene18421-v1.0-hybrid
N
0.872
gene08535-v1.0-hybrid
Fragaria vesca
gene08535-v1.0-hybrid
N
0.872
GLYMA07G15850
Glycine max
GLYMA07G15850
N
0.870
GLYMA18G39771
Glycine max
GLYMA18G39771
N
0.870
Ca_21130
Cicer arietinum
Ca_21130
N
0.870
MTR_7g061550
Medicago truncatula
MTR_7g061550
N
0.870
Lus10025355.g
Linum usitatissimum
Lus10025355.g
N
0.870
orange1.1g018768m.g
Citrus sinensis
orange1.1g018768m.g
N
0.868
Ciclev10012089m.g
Citrus clementina
Ciclev10012089m.g
N
0.868
GSMUA_Achr5G29070_001
Musa acuminata
GSMUA_Achr5G29070_001
N
0.861
GRMZM2G403620
Zea mays
GRMZM2G403620
N
0.855
Sb08g018840
Sorghum bicolor
Sb08g018840
N
0.855
GSMUA_Achr9G03320_001
Musa acuminata
GSMUA_Achr9G03320_001
N
0.840
Traes_5DS_8F3BD4450
Triticum aestivum
Traes_5DS_8F3BD4450
N
0.840
OB12G23330
Oryza brachyantha
OB12G23330
N
0.840
Traes_5BS_E635B0A281
Triticum aestivum
Traes_5BS_E635B0A281
N
0.840
TRIUR3_13997
Triticum urartu
TRIUR3_13997
N
0.840
BRADI4G03970
Brachypodium distachyon
BRADI4G03970
N
0.838
Pavir.Cb00486
Panicum virgatum
Pavir.Cb00486
N
0.838
LPERR12G13690
Leersia perrieri
LPERR12G13690
N
0.838
GSMUA_Achr7G10550_001
Musa acuminata
GSMUA_Achr7G10550_001
N
0.837
OMERI08G15890
Oryza meridionalis
OMERI08G15890
N
0.835
ONIVA02G22170
Oryza nivara
ONIVA02G22170
N
0.835
OPUNC12G14950
Oryza punctata
OPUNC12G14950
N
0.835
BGIOSGA037216
Oryza indica
BGIOSGA037216
N
0.835
OGLUM12G18010
Oryza glumaepatula
OGLUM12G18010
N
0.835
OS12G0572000
Oryza sativa
OS12G0572000
N
0.835
OBART12G16450
Oryza barthii
OBART12G16450
N
0.835
ORGLA12G0144700
Oryza glaberrima
ORGLA12G0144700
N
0.835
ORUFI12G18280
Oryza rufipogon
ORUFI12G18280
N
0.835
AMTR_s00044p00233260
Amborella trichopoda
AMTR_s00044p00233260
N
0.830
GSMUA_Achr9G28330_001
Musa acuminata
GSMUA_Achr9G28330_001
N
0.828
BGIOSGA035973
Oryza indica
BGIOSGA035973
N
0.824
chr3.LjT11G09.160.nc
Lotus japonicus
chr3.LjT11G09.160.nc
N
0.815
TCM_019507
Theobroma cacao
TCM_019507
N
0.808
30167.m000852
Ricinus communis
30167.m000852
N
0.808
Cla007228
Citrullus lanatus
Cla007228
N
0.805
mgf026496m
Mimulus guttatus
mgf026496m
N
0.803
Ciclev10011915m.g
Citrus clementina
Ciclev10011915m.g
N
0.783
Cucsa.031620
Cucumis sativus
Cucsa.031620
N
0.782
gene10329-v1.0-hybrid
Fragaria vesca
gene10329-v1.0-hybrid
N
0.778
MDP0000252887
Malus domestica
MDP0000252887
N
0.771
POPTR_0004s10250
Populus trichocarpa
POPTR_0004s10250
N
0.761
mgf026281m
Mimulus guttatus
mgf026281m
N
0.759
VIT_14s0083g00120
Vitis vinifera
VIT_14s0083g00120
N
0.757
PK14097.1
Cannabis sativa
PK14097.1
N
0.752
POPTR_0017s13950
Populus trichocarpa
POPTR_0017s13950
N
0.745
SapurV1A.0101s0440
Salix purpurea
SapurV1A.0101s0440
N
0.712
GSMUA_Achr9G19380_001
Musa acuminata
GSMUA_Achr9G19380_001
N
0.701