cassava40167.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava40167.m1 T284260_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.672 0.759
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava40167.m1 Myb 50 96
cassava40167.m1 Myb 102 148
cassava40167.m1 Myb 154 196

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm018007 Prunus mume Pm018007 I 0.780
PRUPE_ppa022218mg Prunus persica PRUPE_ppa022218mg I 0.767
TCM_005402 Theobroma cacao TCM_005402 I 0.701
ATMYB3R2 Populus trichocarpa POPTR_0014s07520 N 0.684
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I 0.682
SapurV1A.0533s0050 Salix purpurea SapurV1A.0533s0050 N 0.682
SapurV1A.0586s0030 Salix purpurea SapurV1A.0586s0030 N 0.682
gene19115-v1.0-hybrid Fragaria vesca gene19115-v1.0-hybrid I 0.679
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I 0.678
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I 0.673
evm.TU.supercontig_18.208 Carica papaya evm.TU.supercontig_18.208 N 0.673
TCM_047091 Theobroma cacao TCM_047091 I 0.673
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I 0.673
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D 0.672
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I 0.662