CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava42566.valid.m1
(
Manihot esculenta
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
cassava42566.valid.m1
T284275_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava42566.valid.m1
Myb
5
54
SSSWSRLEDKAFERALVVFPEETLCRWEKIASQVPGKTWFDVKKRYDDLV
cassava42566.valid.m1
Myb
108
155
GVPWTEEEHRLFLIGLQRYGKGDWRSISRNAVVSRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Manihot esculenta
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30055.m001589
Ricinus communis
30055.m001589
I
0.827
VIT_06s0080g00790
Vitis vinifera
VIT_06s0080g00790
I
0.761
Ciclev10029205m.g
Citrus clementina
Ciclev10029205m.g
N
0.726
orange1.1g026855m.g
Citrus sinensis
orange1.1g026855m.g
N
0.726
SapurV1A.0450s0110
Salix purpurea
SapurV1A.0450s0110
I
0.724
SapurV1A.1671s0040
Salix purpurea
SapurV1A.1671s0040
I
0.724
GSMUA_Achr1G17730_001
Musa acuminata
GSMUA_Achr1G17730_001
I
0.704
POPTR_0001s25590
Populus trichocarpa
POPTR_0001s25590
I
0.688
VIT_18s0001g02210
Vitis vinifera
VIT_18s0001g02210
N
0.686
VIT_10s0071g00660
Vitis vinifera
VIT_10s0071g00660
I
0.684
GSMUA_Achr9G20620_001
Musa acuminata
GSMUA_Achr9G20620_001
I
0.683
mgf022442m
Mimulus guttatus
mgf022442m
I
0.682
GLYMA10G42450
Glycine max
GLYMA10G42450
I
0.681
GLYMA20G24600
Glycine max
GLYMA20G24600
I
0.681
evm.TU.supercontig_138.5
Carica papaya
evm.TU.supercontig_138.5
I
0.679
Cucsa.280970
Cucumis sativus
Cucsa.280970
I
0.679
Cla020348
Citrullus lanatus
Cla020348
I
0.678
Aquca_072_00078
Aquilegia coerulea
Aquca_072_00078
N
0.673
TCM_041362
Theobroma cacao
TCM_041362
N
0.668
cassava1257.valid.m1
Manihot esculenta
cassava1257.valid.m1
I
0.667
Aquca_035_00057
Aquilegia coerulea
Aquca_035_00057
I
0.664
TCM_007672
Theobroma cacao
TCM_007672
I
0.663
30131.m007263
Ricinus communis
30131.m007263
I
0.663
GLYMA20G01450
Glycine max
GLYMA20G01450
I
0.663
SapurV1A.0036s0350
Salix purpurea
SapurV1A.0036s0350
I
0.661