cassava42566.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava42566.valid.m1 T284275_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava42566.valid.m1 Myb 5 54
cassava42566.valid.m1 Myb 108 155

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30055.m001589 Ricinus communis 30055.m001589 I 0.827
30131.m007263 Ricinus communis 30131.m007263 I 0.663
Aquca_035_00057 Aquilegia coerulea Aquca_035_00057 I 0.664
Aquca_072_00078 Aquilegia coerulea Aquca_072_00078 N 0.673
cassava1257.valid.m1 Manihot esculenta cassava1257.valid.m1 I 0.667
Ciclev10029205m.g Citrus clementina Ciclev10029205m.g N 0.726
Cla020348 Citrullus lanatus Cla020348 I 0.678
Cucsa.280970 Cucumis sativus Cucsa.280970 I 0.679
evm.TU.supercontig_138.5 Carica papaya evm.TU.supercontig_138.5 I 0.679
GLYMA10G42450 Glycine max GLYMA10G42450 I 0.681
GLYMA20G01450 Glycine max GLYMA20G01450 I 0.663
GLYMA20G24600 Glycine max GLYMA20G24600 I 0.681
GSMUA_Achr1G17730_001 Musa acuminata GSMUA_Achr1G17730_001 I 0.704
GSMUA_Achr9G20620_001 Musa acuminata GSMUA_Achr9G20620_001 I 0.683
mgf022442m Mimulus guttatus mgf022442m I 0.682
orange1.1g026855m.g Citrus sinensis orange1.1g026855m.g N 0.726
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.688
SapurV1A.0036s0350 Salix purpurea SapurV1A.0036s0350 I 0.661
SapurV1A.0450s0110 Salix purpurea SapurV1A.0450s0110 I 0.724
SapurV1A.1671s0040 Salix purpurea SapurV1A.1671s0040 I 0.724
TCM_007672 Theobroma cacao TCM_007672 I 0.663
TCM_041362 Theobroma cacao TCM_041362 N 0.668
VIT_06s0080g00790 Vitis vinifera VIT_06s0080g00790 I 0.761
VIT_10s0071g00660 Vitis vinifera VIT_10s0071g00660 I 0.684
VIT_18s0001g02210 Vitis vinifera VIT_18s0001g02210 N 0.686