cassava43649.valid.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava43649.valid.m1 T284285_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GPRI1
M00874_2.00
Arabidopsis thaliana
NNDATHN

NDATHNN
PBM
Franco-Zorrilla et al.(2014)
GLK1
0.888 0.957
APRR2
M02300_2.00
Arabidopsis thaliana
NNRNWATCNN

NNGATWNYNN
PBM
Weirauch et al.(2014)
pTH7102
0.668 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava43649.valid.m1 Myb 150 200

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
NCU09615 Neurospora crassa NCU09615 N 0.000
NEUTE1DRAFT_123505 Neurospora tetrasperma NEUTE1DRAFT_123505 N 0.000
PODANS_6_3700 Podospora anserina PODANS_6_3700 N 0.000
SMAC_08912 Sordaria macrospora SMAC_08912 N 0.000