cassava44228.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava44228.m1 T284293_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.845 0.882
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava44228.m1 Myb 13 68
cassava44228.m1 Myb 74 119

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0149s0490 Salix purpurea SapurV1A.0149s0490 I 0.868
SapurV1A.4138s0010 Salix purpurea SapurV1A.4138s0010 I 0.868
30125.m001257 Ricinus communis 30125.m001257 I 0.862
Bostr.3640s0047 Boechera stricta Bostr.3640s0047 I 0.862
cassava33147.m1 Manihot esculenta cassava33147.m1 I 0.848
Gorai.004G268300 Gossypium raimondii Gorai.004G268300 I 0.847
ATY53 Arabidopsis lyrata scaffold_301452.1 I 0.846
Carubv10015099m.g Capsella rubella Carubv10015099m.g I 0.845
Cagra.5641s0037 Capsella grandiflora Cagra.5641s0037 I 0.845
ATY53 Arabidopsis thaliana AT3G12720 D 0.845
TCM_005977 Theobroma cacao TCM_005977 I 0.843
GLYMA08G17371 Glycine max GLYMA08G17371 I 0.839
POPTR_0008s08110 Populus trichocarpa POPTR_0008s08110 I 0.838
Bo1g138990 Brassica oleracea Bo1g138990 I 0.837
Thhalv10022066m.g Eutrema salsugineum Thhalv10022066m.g I 0.837
Bra039339 Brassica rapa Bra039339 I 0.837
SapurV1A.0122s0490 Salix purpurea SapurV1A.0122s0490 I 0.835
Pm010927 Prunus mume Pm010927 I 0.833
Bra034738 Brassica rapa Bra034738 I 0.828
Bo5g133210 Brassica oleracea Bo5g133210 I 0.828
ATY53 Vitis vinifera VIT_19s0085g00940 I 0.826
27956.m000359 Ricinus communis 27956.m000359 I 0.822
MTR_2g064160 Medicago truncatula MTR_2g064160 I 0.822
TCM_033645 Theobroma cacao TCM_033645 I 0.820
POPTR_0003s15440 Populus trichocarpa POPTR_0003s15440 I 0.817
Eucgr.E04323 Eucalyptus grandis Eucgr.E04323 I 0.816
SapurV1A.0093s0250 Salix purpurea SapurV1A.0093s0250 I 0.814
POPTR_0001s12240 Populus trichocarpa POPTR_0001s12240 I 0.805
LjT35F06.10.nd Lotus japonicus LjT35F06.10.nd I 0.803
orange1.1g039070m.g Citrus sinensis orange1.1g039070m.g I 0.801
Ciclev10018009m.g Citrus clementina Ciclev10018009m.g I 0.801
MDP0000157506 Malus domestica MDP0000157506 I 0.798
Ciclev10006752m.g Citrus clementina Ciclev10006752m.g I 0.796
SapurV1A.0236s0090 Salix purpurea SapurV1A.0236s0090 I 0.796
orange1.1g036087m.g Citrus sinensis orange1.1g036087m.g I 0.796
GLYMA15G41810 Glycine max GLYMA15G41810 I 0.795
Aquca_030_00294 Aquilegia coerulea Aquca_030_00294 I 0.791
MDP0000226667 Malus domestica MDP0000226667 I 0.791
cassava11527.m1 Manihot esculenta cassava11527.m1 I 0.789
cassava26068.m1 Manihot esculenta cassava26068.m1 I 0.789
chr3.CM0049.330.nc Lotus japonicus chr3.CM0049.330.nc I 0.786
VIT_01s0010g00410 Vitis vinifera VIT_01s0010g00410 I 0.782
Pm010847 Prunus mume Pm010847 I 0.776
PRUPE_ppa026618mg Prunus persica PRUPE_ppa026618mg I 0.776
POPTR_0010s18170 Populus trichocarpa POPTR_0010s18170 I 0.770
PRUPE_ppa022859mg Prunus persica PRUPE_ppa022859mg I 0.769
Solyc02g082040.2 Solanum lycopersicum Solyc02g082040.2 I 0.762
GLYMA15G02955 Glycine max GLYMA15G02955 I 0.757
gene19715-v1.0-hybrid Fragaria vesca gene19715-v1.0-hybrid I 0.757
GSMUA_Achr8G03510_001 Musa acuminata GSMUA_Achr8G03510_001 I 0.757
MTR_8g017540 Medicago truncatula MTR_8g017540 I 0.754
MDP0000148894 Malus domestica MDP0000148894 I 0.747
Lus10015608.g Linum usitatissimum Lus10015608.g I 0.747
Ca_02730 Cicer arietinum Ca_02730 I 0.747
gene19934-v1.0-hybrid Fragaria vesca gene19934-v1.0-hybrid I 0.747
Pm013322 Prunus mume Pm013322 I 0.747
Gorai.011G063900 Gossypium raimondii Gorai.011G063900 I 0.747
GLYMA08G20440 Glycine max GLYMA08G20440 I 0.747
PK22855.1 Cannabis sativa PK22855.1 I 0.747
Ca_10069 Cicer arietinum Ca_10069 I 0.747
GLYMA13G42431 Glycine max GLYMA13G42431 I 0.747
PRUPE_ppa015032mg Prunus persica PRUPE_ppa015032mg I 0.747
AMTR_s00032p00221670 Amborella trichopoda AMTR_s00032p00221670 I 0.747
TCM_029065 Theobroma cacao TCM_029065 I 0.747
GLYMA07G01050 Glycine max GLYMA07G01050 I 0.747
MYB26 Populus trichocarpa POPTR_0001s20370 I 0.744
MTR_8g017440 Medicago truncatula MTR_8g017440 I 0.744
cassava176.valid.m1 Manihot esculenta cassava176.valid.m1 I 0.744
SapurV1A.0177s0130 Salix purpurea SapurV1A.0177s0130 I 0.744
Aquca_020_00444 Aquilegia coerulea Aquca_020_00444 I 0.743
Cucsa.340960 Cucumis sativus Cucsa.340960 I 0.742
Cla012793 Citrullus lanatus Cla012793 I 0.742
Solyc03g121740.1 Solanum lycopersicum Solyc03g121740.1 I 0.739
GSMUA_Achr9G11190_001 Musa acuminata GSMUA_Achr9G11190_001 I 0.739
Thhalv10021042m.g Eutrema salsugineum Thhalv10021042m.g I 0.738
Bo1g134790 Brassica oleracea Bo1g134790 I 0.738
Bra021515 Brassica rapa Bra021515 I 0.738
Eucgr.F03143 Eucalyptus grandis Eucgr.F03143 I 0.738
Gorai.009G142200 Gossypium raimondii Gorai.009G142200 I 0.736
cassava34928.m1 Manihot esculenta cassava34928.m1 I 0.735
MTR_8g017500 Medicago truncatula MTR_8g017500 I 0.734
SapurV1A.1869s0040 Salix purpurea SapurV1A.1869s0040 I 0.734
SapurV1A.0538s0150 Salix purpurea SapurV1A.0538s0150 I 0.734
gene06920-v1.0-hybrid Fragaria vesca gene06920-v1.0-hybrid I 0.734
Solyc10g005240.2 Solanum lycopersicum Solyc10g005240.2 I 0.732
GSMUA_Achr9G25110_001 Musa acuminata GSMUA_Achr9G25110_001 I 0.729
Ciclev10027201m.g Citrus clementina Ciclev10027201m.g I 0.723
BGIOSGA004306 Oryza indica BGIOSGA004306 I 0.720
ORGLA01G0234600 Oryza glaberrima ORGLA01G0234600 I 0.720
OLONG_008660 Oryza longistaminata OLONG_008660 I 0.720
OS01G0709000 Oryza sativa OS01G0709000 I 0.720
PK29171.1 Cannabis sativa PK29171.1 I 0.718
Si030152m.g Setaria italica Si030152m.g I 0.717
GRMZM2G172327 Zea mays GRMZM2G172327 I 0.717
OS07G0497500 Oryza sativa OS07G0497500 I 0.717
Pavir.Bb02786 Panicum virgatum Pavir.Bb02786 I 0.717
Pavir.Ba00923 Panicum virgatum Pavir.Ba00923 I 0.717
OMERI07G11910 Oryza meridionalis OMERI07G11910 I 0.717
OBART07G15150 Oryza barthii OBART07G15150 I 0.717
MTR_2g099740 Medicago truncatula MTR_2g099740 I 0.717
BGIOSGA024270 Oryza indica BGIOSGA024270 I 0.717
LPERR07G12760 Leersia perrieri LPERR07G12760 I 0.717
OPUNC07G13970 Oryza punctata OPUNC07G13970 I 0.717
PGSC0003DMG400007325 Solanum tuberosum PGSC0003DMG400007325 I 0.717
Sb02g033830 Sorghum bicolor Sb02g033830 I 0.717
ORUFI07G15620 Oryza rufipogon ORUFI07G15620 I 0.717
evm.TU.supercontig_25.69 Carica papaya evm.TU.supercontig_25.69 I 0.717
ORGLA07G0124200 Oryza glaberrima ORGLA07G0124200 I 0.717
MLOC_56753 Hordeum vulgare MLOC_56753 I 0.714
MTR_8g017350 Medicago truncatula MTR_8g017350 I 0.714
F775_00835 Aegilops tauschii F775_00835 I 0.714
TRIUR3_26358 Triticum urartu TRIUR3_26358 I 0.714
Traes_2AS_40FA27AE7 Triticum aestivum Traes_2AS_40FA27AE7 I 0.714
MYB26 Vitis vinifera VIT_09s0002g01670 I 0.713
BRADI2G47887 Brachypodium distachyon BRADI2G47887 I 0.711
Pavir.Ea02594 Panicum virgatum Pavir.Ea02594 I 0.711
OB01G37410 Oryza brachyantha OB01G37410 I 0.711
OPUNC01G28160 Oryza punctata OPUNC01G28160 I 0.711
LPERR01G24370 Leersia perrieri LPERR01G24370 I 0.711
Sb03g032600 Sorghum bicolor Sb03g032600 I 0.711
MTR_8g017340 Medicago truncatula MTR_8g017340 I 0.710
PGSC0003DMG400037038 Solanum tuberosum PGSC0003DMG400037038 I 0.709
Bostr.28625s0318 Boechera stricta Bostr.28625s0318 I 0.708
MYB26 Arabidopsis lyrata fgenesh2_kg.3__1496__AT3G13890.1 I 0.708
MYB26 Arabidopsis thaliana AT3G13890 I 0.708
Si002319m.g Setaria italica Si002319m.g I 0.708
Carubv10015767m.g Capsella rubella Carubv10015767m.g I 0.708
Cagra.0736s0026 Capsella grandiflora Cagra.0736s0026 I 0.708
GSMUA_Achr6G35800_001 Musa acuminata GSMUA_Achr6G35800_001 I 0.707
mgf026023m Mimulus guttatus mgf026023m I 0.705
MTR_8g017390 Medicago truncatula MTR_8g017390 I 0.692
OB07G21090 Oryza brachyantha OB07G21090 I 0.692
Traes_2BS_CA02DC5B2 Triticum aestivum Traes_2BS_CA02DC5B2 I 0.689
Pavir.J21520 Panicum virgatum Pavir.J21520 I 0.689
OB06G17320 Oryza brachyantha OB06G17320 I 0.686
OS08G0151300 Oryza sativa OS08G0151300 I 0.685
OMERI08G02950 Oryza meridionalis OMERI08G02950 I 0.685
ORUFI08G03380 Oryza rufipogon ORUFI08G03380 I 0.685
ONIVA06G02400 Oryza nivara ONIVA06G02400 I 0.685
OB08G13090 Oryza brachyantha OB08G13090 I 0.685
ORGLA08G0023900 Oryza glaberrima ORGLA08G0023900 I 0.685
OBART08G03020 Oryza barthii OBART08G03020 I 0.685
BGIOSGA027659 Oryza indica BGIOSGA027659 I 0.685
Pavir.Fb00364 Panicum virgatum Pavir.Fb00364 I 0.685
OGLUM08G03030 Oryza glumaepatula OGLUM08G03030 I 0.685
Sb07g003320 Sorghum bicolor Sb07g003320 I 0.685
Pavir.J29561 Panicum virgatum Pavir.J29561 I 0.685
LPERR08G03020 Leersia perrieri LPERR08G03020 I 0.685
GRMZM2G325907 Zea mays GRMZM2G325907 I 0.685
Carubv10020714m.g Capsella rubella Carubv10020714m.g I 0.684
Cagra.10702s0006 Capsella grandiflora Cagra.10702s0006 I 0.684
AMTR_s00079p00143780 Amborella trichopoda AMTR_s00079p00143780 I 0.681
LPERR06G07150 Leersia perrieri LPERR06G07150 I 0.679
BRADI1G61397 Brachypodium distachyon BRADI1G61397 I 0.678
F775_17110 Aegilops tauschii F775_17110 I 0.678
Traes_3AL_E3BF20F0D Triticum aestivum Traes_3AL_E3BF20F0D I 0.678
TRIUR3_25230 Triticum urartu TRIUR3_25230 I 0.678
MLOC_18177 Hordeum vulgare MLOC_18177 I 0.678
GRMZM2G088783 Zea mays GRMZM2G088783 I 0.678
BRADI1G26920 Brachypodium distachyon BRADI1G26920 I 0.669
GSMUA_Achr10G08070_001 Musa acuminata GSMUA_Achr10G08070_001 I 0.668
OPUNC08G02760 Oryza punctata OPUNC08G02760 I 0.668
PDK_20s1854611g001 Phoenix dactylifera PDK_20s1854611g001 I 0.668
Bra027389 Brassica rapa Bra027389 I 0.667
Traes_7DL_5BD0D4BD1 Triticum aestivum Traes_7DL_5BD0D4BD1 I 0.665
TRIUR3_24104 Triticum urartu TRIUR3_24104 I 0.665
BRADI3G17165 Brachypodium distachyon BRADI3G17165 I 0.665
F775_28951 Aegilops tauschii F775_28951 I 0.665
MLOC_16981 Hordeum vulgare MLOC_16981 I 0.665
evm.TU.supercontig_18.232 Carica papaya evm.TU.supercontig_18.232 I 0.665
GSMUA_AchrUn_randomG15560_001 Musa acuminata GSMUA_AchrUn_randomG15560_001 I 0.663
VIT_05s0020g01100 Vitis vinifera VIT_05s0020g01100 I 0.663
ORUFI08G20890 Oryza rufipogon ORUFI08G20890 I 0.662
ORGLA08G0162300 Oryza glaberrima ORGLA08G0162300 I 0.662
30054.m000809 Ricinus communis 30054.m000809 I 0.662
ONIVA08G20680 Oryza nivara ONIVA08G20680 I 0.662
OMERI08G14710 Oryza meridionalis OMERI08G14710 I 0.662
OGLUM08G19650 Oryza glumaepatula OGLUM08G19650 I 0.662
Pavir.Fb01820 Panicum virgatum Pavir.Fb01820 I 0.662
OB08G25790 Oryza brachyantha OB08G25790 I 0.662